RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 CDK17Q00537 523 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 SPIRE1Q08AE8 756 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 FXNQ16595 210 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 CYP4F22Q6NT55 531 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 PRRT2Q7Z6L0 340 aaPredicted RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 GPBP1Q86WP2 473 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 MIPOL1Q8TD10 442 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 LENG9Q96B70 501 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 PTPN18Q99952 460 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 INO80BQ9C086 356 aaPredicted RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 SEMA6BQ9H3T3 888 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 TUFT1Q9NNX1 390 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 RASSF10A6NK89 507 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 B4DLN1 442 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 WDR46O15213 610 aaKnown RBP8.26□□□□□ -1.09
TRIM42-201ENST00000286349 IVLP07476 585 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 SLC10A3P09131 477 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 FDX1P10109 184 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 PYGBP11216 843 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 RAB27AP51159 221 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 SLC12A3P55017 1021 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 C1QTNF8P60827 252 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 KRT83P78385 493 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 ZBED6P86452 979 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 ECM1Q16610 540 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 VWA3BQ502W6 1294 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 TREML2Q5T2D2 321 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 POTEEQ6S8J3 1075 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 KCNK18Q7Z418 384 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 SDCCAG8Q86SQ7 713 aaPredicted RBP8.26□□□□□ -1.09
TRIM42-201ENST00000286349 MCF2L2Q86YR7 1114 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CCDC170Q8IYT3 715 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 SYT2Q8N9I0 419 aaPredicted RBP8.26□□□□□ -1.09
TRIM42-201ENST00000286349 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 EDEM3Q9BZQ6 932 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 PHIPQ8WWQ0 1821 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 TRPM7Q96QT4 1865 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 POTEB3A0JP26 581 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 FAM86B1E9PN63 330 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 OPLAHO14841 1288 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 MSH4O15457 936 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 SSBP05455 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRIM42-201ENST00000286349 FAM86B2P0C5J1 330 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CCDC159P0C7I6 412 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CYP11B2P19099 503 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CDR1P51861 262 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CCNHP51946 323 aaPredicted RBP8.26□□□□□ -1.09
TRIM42-201ENST00000286349 MEA1Q16626 185 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 DEFB115Q30KQ5 88 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 ARHGAP29Q52LW3 1261 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 NCAPH2Q6IBW4 605 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 POTEBQ6S5H4 581 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 RAD9BQ6WBX8 426 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 GBP6Q6ZN66 633 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 CATSPER3Q86XQ3 398 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 GIMAP1Q8WWP7 306 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 BRI3BPQ8WY22 251 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 KIFC2Q96AC6 838 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 C12orf42Q96LP6 360 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 WDR11Q9BZH6 1224 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 IFT122Q9HBG6 1241 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 AS3MTQ9HBK9 375 aa8.26□□□□□ -1.09
TRIM42-201ENST00000286349 DOCK1Q14185 1865 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 TTC26A0AVF1 554 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 C19orf81C9J6K1 198 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 E9PMD0 336 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 AOC2O75106 756 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 RTN2O75298 545 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 MED24O75448 989 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 PARNO95453 639 aaKnown RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 CFBP00751 764 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 ICAM1P05362 532 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 PYGLP06737 847 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 MNAT1P51948 309 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 USP14P54578 494 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 MARSP56192 900 aaKnown RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 SNAP25P60880 206 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 PPP2R3AQ06190 1150 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 PPP2R5CQ13362 524 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 EDRF1Q3B7T1 1238 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 HERC4Q5GLZ8 1057 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 MIIPQ5JXC2 388 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 UHMK1Q8TAS1 419 aaKnown RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 PCMTD1Q96MG8 357 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 TTYH3Q9C0H2 523 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 NDST4Q9H3R1 872 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 KCND2Q9NZV8 630 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 VAV3Q9UKW4 847 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 ZNF215Q9UL58 517 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 FAM184BQ9ULE4 1060 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 COL4A3BPQ9Y5P4 624 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 IGLV3-22A0A075B6J6 115 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 URI1O94763 535 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 EYA4O95677 639 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 GAP43P17677 238 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms