RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 CDKL2Q92772 493 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 TUBGCP3Q96CW5 907 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.04
PTPRO-201ENST00000281171 MRPL44Q9H9J2 332 aaKnown RBP15.33■□□□□ 0.04
PTPRO-201ENST00000281171 EURLQ9NYK6 297 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 DCTN4Q9UJW0 460 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 COPG1Q9Y678 874 aaKnown RBP15.33■□□□□ 0.04
PTPRO-201ENST00000281171 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 LIN7AO14910 233 aaPredicted RBP15.33■□□□□ 0.04
PTPRO-201ENST00000281171 TTI1O43156 1089 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 MTTPP55157 894 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 SIK1P57059 783 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 NUP107P57740 925 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 LRRC14Q15048 493 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 WDR93Q6P2C0 686 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 FAM196AQ6ZSG2 479 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 DHTKD1Q96HY7 919 aaPredicted RBP15.33■□□□□ 0.04
PTPRO-201ENST00000281171 AP4S1Q9Y587 144 aa15.33■□□□□ 0.04
PTPRO-201ENST00000281171 CPP00450 1065 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 DCUN1D2Q6PH85 259 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 HDAC6Q9UBN7 1215 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 SESN1Q9Y6P5 492 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 EIF2S1P05198 315 aaKnown RBP15.32■□□□□ 0.04
PTPRO-201ENST00000281171 XRCC5P13010 732 aaKnown RBP15.32■□□□□ 0.04
PTPRO-201ENST00000281171 RAB14P61106 215 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 LRRC1Q9BTT6 524 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 TOM1L1O75674 476 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 ATF7P17544 494 aaPredicted RBP15.32■□□□□ 0.04
PTPRO-201ENST00000281171 HSPA13P48723 471 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 BFSP1Q12934 665 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 NDUFA5Q16718 116 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 ZIM3Q96PE6 472 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 MMS19Q96T76 1030 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 PKD2L2Q9NZM6 624 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 SH3GLB1Q9Y371 365 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 ZNF804BA4D1E1 1349 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 SH3BP5O60239 455 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 RFX8Q6ZV50 586 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 TERB1Q8NA31 727 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 CARD8Q9Y2G2 431 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 RFX7Q2KHR2 1363 aa15.32■□□□□ 0.04
PTPRO-201ENST00000281171 TNKSO95271 1327 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 PRDM1O75626 825 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 SERPING1P05155 500 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 GCLCP48506 637 aaPredicted RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 ZNF554Q86TJ5 538 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 MTA3Q9BTC8 594 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 TEKT3Q9BXF9 490 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 DNAJC17Q9NVM6 304 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 GCNT3O95395 438 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 APBA3O96018 575 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 MYCLP12524 364 aaPredicted RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 CCNHP51946 323 aaPredicted RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 STKLD1Q8NE28 680 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 THAP9Q9H5L6 903 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 METP08581 1390 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 KPNA4O00629 521 aaPredicted RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 ATP9AO75110 1047 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 GAP43P17677 238 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 PTH1RQ03431 593 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 CHRNDQ07001 517 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 TRIP10Q15642 601 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 FOXR1Q6PIV2 292 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 FUKQ8N0W3 1084 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 SLITRK6Q9H5Y7 841 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 NOC2LQ9Y3T9 749 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 SMAPO00193 183 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 OCM2P0CE71 109 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 OCMP0CE72 109 aaPredicted RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 TMPRSS15P98073 1019 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 CRELD2Q6UXH1 353 aaPredicted RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 YTHDF3Q7Z739 585 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 MLXIPLQ9NP71 852 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 A1CFQ9NQ94 594 aaKnown RBP15.31■□□□□ 0.04
PTPRO-201ENST00000281171 PLA2R1Q13018 1463 aa15.31■□□□□ 0.04
PTPRO-201ENST00000281171 BPIFB4P59827 614 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 ADCK5Q3MIX3 580 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
PTPRO-201ENST00000281171 BRD8Q9H0E9 1235 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 SNX24Q9Y343 169 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 MYBL1P10243 752 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 GSTT1P30711 240 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 PPM1FP49593 454 aaPredicted RBP15.3■□□□□ 0.04
PTPRO-201ENST00000281171 GTF2IP78347 998 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 PPIDQ08752 370 aaKnown RBP15.3■□□□□ 0.04
PTPRO-201ENST00000281171 RCN1Q15293 331 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
PTPRO-201ENST00000281171 DYMQ7RTS9 669 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 MB21D1Q8N884 522 aa15.3■□□□□ 0.04
PTPRO-201ENST00000281171 DEPTORQ8TB45 409 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms