RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 BTBD7Q9P203 1132 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 PCDHA10Q9Y5I2 948 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 GLTPD2A6NH11 291 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 ZNF862O60290 1169 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 FDX1P10109 184 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 HNRNPH3P31942 346 aaKnown RBP19.62■□□□□ 0.73
CAPN1-201ENST00000279247 CXCR5P32302 372 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 MKRN3Q13064 507 aaKnown RBP19.62■□□□□ 0.73
CAPN1-201ENST00000279247 CBWD6Q4V339 395 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 CBWD3Q5JTY5 395 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 CBWD5Q5RIA9 395 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 MOV10L1Q9BXT6 1211 aaKnown RBP19.62■□□□□ 0.73
CAPN1-201ENST00000279247 METTL14Q9HCE5 456 aaKnown RBP19.62■□□□□ 0.73
CAPN1-201ENST00000279247 SEL1LQ9UBV2 794 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 A0A087X0T9 212 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 FAM228BP0C875 321 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 DLG4P78352 724 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 IRX3P78415 501 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-201ENST00000279247 KLHDC7AQ5VTJ3 777 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 SRGAP1Q7Z6B7 1085 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 ELMO3Q96BJ8 720 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 PACSIN1Q9BY11 444 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 JPH1Q9HDC5 661 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-201ENST00000279247 ECM2O94769 699 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-201ENST00000279247 JAK3P52333 1124 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 SP2Q02086 613 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 CCDC60Q8IWA6 550 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-201ENST00000279247 IQCDQ96DY2 449 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 CCDC94Q9BW85 323 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-201ENST00000279247 MAP3K20Q9NYL2 800 aaKnown RBP19.61■□□□□ 0.73
CAPN1-201ENST00000279247 ZSCAN20P17040 1043 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-201ENST00000279247 CDK17Q00537 523 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 GHRHRQ02643 423 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 ARHGAP44Q17R89 818 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 MTERF2Q49AM1 385 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 CAGE1Q8TC20 777 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 KCND2Q9NZV8 630 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 MYO1AQ9UBC5 1043 aa19.61■□□□□ 0.73
CAPN1-201ENST00000279247 NCK2O43639 380 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 SERPING1P05155 500 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 PLS3P13797 630 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 KCNA2P16389 499 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 MUTP22033 750 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 SAAL1Q96ER3 474 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 CDCA5Q96FF9 252 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 INPP4AQ96PE3 977 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-201ENST00000279247 ADAMTS5Q9UNA0 930 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 GFPT2O94808 682 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 PTK2Q05397 1052 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
CAPN1-201ENST00000279247 FAM84AQ96KN4 292 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 TAF1DQ9H5J8 278 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-201ENST00000279247 SAR1BQ9Y6B6 198 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 CTAGE15A4D2H0 777 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 CTAGE8P0CG41 777 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 CTAGE6Q86UF2 777 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 CTAGE4Q8IX94 777 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 C4orf19Q8IY42 314 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 NOA1Q8NC60 698 aaKnown RBP19.6■□□□□ 0.73
CAPN1-201ENST00000279247 PARD6BQ9BYG5 372 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 ZNF446Q9NWS9 450 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 SLC9A2Q9UBY0 812 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 PPP2R3BQ9Y5P8 575 aa19.6■□□□□ 0.73
CAPN1-201ENST00000279247 SLC16A3O15427 465 aaKnown RBP19.59■□□□□ 0.73
CAPN1-201ENST00000279247 PGK2P07205 417 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 SFNP31947 248 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 FMO5P49326 533 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 ACTR2P61160 394 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 KCTD17Q8N5Z5 321 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 CCDC127Q96BQ5 260 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 SMARCAL1Q9NZC9 954 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 DBR1Q9UK59 544 aaKnown RBP19.59■□□□□ 0.73
CAPN1-201ENST00000279247 RLFQ13129 1914 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 TMCO5BA8MYB1 307 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 GCLMP48507 274 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 BSNDQ8WZ55 320 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 GPRASP2Q96D09 838 aa19.59■□□□□ 0.73
CAPN1-201ENST00000279247 MRPS25P82663 173 aaKnown RBP19.58■□□□□ 0.73
CAPN1-201ENST00000279247 KIAA0753Q2KHM9 967 aa19.58■□□□□ 0.73
CAPN1-201ENST00000279247 IQCEQ6IPM2 695 aa19.58■□□□□ 0.73
CAPN1-201ENST00000279247 CEP112Q8N8E3 955 aa19.58■□□□□ 0.73
CAPN1-201ENST00000279247 SEPT11Q9NVA2 429 aaKnown RBP19.58■□□□□ 0.73
CAPN1-201ENST00000279247 PNMA2Q9UL42 364 aa19.58■□□□□ 0.73
CAPN1-201ENST00000279247 TACC1O75410 805 aa19.58■□□□□ 0.72
CAPN1-201ENST00000279247 IREB2P48200 963 aaKnown RBP19.58■□□□□ 0.72
CAPN1-201ENST00000279247 OAZ1P54368 228 aa19.58■□□□□ 0.72
CAPN1-201ENST00000279247 PRKCEQ02156 737 aa19.58■□□□□ 0.72
CAPN1-201ENST00000279247 GNPTABQ3T906 1256 aa19.58■□□□□ 0.72
CAPN1-201ENST00000279247 EHBP1Q8NDI1 1231 aa19.58■□□□□ 0.72
CAPN1-201ENST00000279247 ACCSQ96QU6 501 aa19.58■□□□□ 0.72
CAPN1-201ENST00000279247 DENND3A2RUS2 1198 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 KRT13P13646 458 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 MATR3P43243 847 aaKnown RBP eCLIP19.57■□□□□ 0.724e-6■□□□□ 9.5
CAPN1-201ENST00000279247 AMPD2Q01433 879 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 RSRC2Q7L4I2 434 aaKnown RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 ZNF571Q7Z3V5 609 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 BORCS6Q96GS4 357 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 MMS19Q96T76 1030 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 EDEM3Q9BZQ6 932 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms