RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
UPF3B-201ENST00000276201 TMEM59LQ9UK28 342 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 GABRQQ9UN88 632 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 MAPK8IP1Q9UQF2 711 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 PSEN1P49768 467 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 BIRC3Q13489 604 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC178Q5BJE1 867 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 SPDYCQ5MJ68 293 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
UPF3B-201ENST00000276201 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 ADAMTS5Q9UNA0 930 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 PCDHGC5Q9Y5F6 944 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 DOCK3Q8IZD9 2030 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 BMP3P12645 472 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 KLK7P49862 253 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 PRMT2P55345 433 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 LRRC63Q05C16 580 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 CUL1Q13616 776 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 NEDD9Q14511 834 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
UPF3B-201ENST00000276201 INPP4AQ96PE3 977 aaPredicted RBP11.28□□□□□ -0.6
UPF3B-201ENST00000276201 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 SAMM50Q9Y512 469 aa11.28□□□□□ -0.6
UPF3B-201ENST00000276201 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
UPF3B-201ENST00000276201 PLXNB2O15031 1838 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 VWA5AO00534 786 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.6
UPF3B-201ENST00000276201 AKR1B10O60218 316 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 HOXD10P28358 340 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 SLC1A4P43007 532 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 PDE4DQ08499 809 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 NAB2Q15742 525 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 REPS2Q8NFH8 660 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 COA7Q96BR5 231 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 ISCUQ9H1K1 167 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 KLC4Q9NSK0 619 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 MTMR7Q9Y216 660 aa11.27□□□□□ -0.6
UPF3B-201ENST00000276201 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 H0YHG0 523 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 HEXIM1O94992 359 aaKnown RBP11.27□□□□□ -0.61
UPF3B-201ENST00000276201 GLI1P08151 1106 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 GHRP10912 638 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 MAPK4P31152 587 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 TNNC1P63316 161 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 IFFO1Q0D2I5 559 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 MEI1Q5TIA1 1274 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 CABP7Q86V35 215 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 DGKHQ86XP1 1220 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 ZBTB9Q96C00 473 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 CALR3Q96L12 384 aaKnown RBP11.27□□□□□ -0.61
UPF3B-201ENST00000276201 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
UPF3B-201ENST00000276201 MOV10L1Q9BXT6 1211 aaKnown RBP11.27□□□□□ -0.61
UPF3B-201ENST00000276201 SPATC1LQ9H0A9 340 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 STK17AQ9UEE5 414 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 FEM1BQ9UK73 627 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
UPF3B-201ENST00000276201 MYH7BA7E2Y1 1941 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 CCDC194A0A1B0GVG4 234 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 CARSP49589 748 aaKnown RBP11.26□□□□□ -0.61
UPF3B-201ENST00000276201 FLT3LGP49771 235 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 CCNA1P78396 465 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 PSMD2Q13200 908 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 GRM4Q14833 912 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 C10orf76Q5T2E6 689 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 HGSNATQ68CP4 663 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 RUFY4Q6ZNE9 571 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 GPR142Q7Z601 462 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 DCAF4Q8WV16 495 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 CASKIN2Q8WXE0 1202 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 LRRC45Q96CN5 670 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 SEMA6BQ9H3T3 888 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 RIC8AQ9NPQ8 531 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 CEP72Q9P209 647 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 GJD2Q9UKL4 321 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 PCDHA6Q9UN73 950 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 PCDHA8Q9Y5H6 950 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 H0YGN5 161 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 MYO1FO00160 1098 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 SERPING1P05155 500 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 PLEKP08567 350 aaPredicted RBP11.26□□□□□ -0.61
UPF3B-201ENST00000276201 MRPL12P52815 198 aaKnown RBP11.26□□□□□ -0.61
UPF3B-201ENST00000276201 STK4Q13043 487 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 RAET1EQ8TD07 263 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 LRRC15Q8TF66 581 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 MTMR8Q96EF0 704 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 TMEM60Q9H2L4 133 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms