RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 TMEM259Q4ZIN3 620 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 PP2D1A8MPX8 630 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 MYL1P05976 194 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 AP1B1Q10567 949 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ANKRD20A2Q5SQ80 823 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ANKRD20A1Q5TYW2 823 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 CENPUQ71F23 418 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 VSTM4Q8IW00 320 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 BEST2Q8NFU1 509 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 EDEM3Q9BZQ6 932 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 RASGRF2O14827 1237 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 TJP3O95049 919 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 NR3C1P04150 777 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 ARID5BQ14865 1188 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 KDELC2Q7Z4H8 507 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 TRIM42Q8IWZ5 723 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 ENOX1Q8TC92 643 aaKnown RBP12.71□□□□□ -0.37
SHPRH-201ENST00000275233 CCDC138Q96M89 665 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 SYNMO15061 1565 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 PPFIA2O75334 1257 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 KPNA2P52292 529 aaKnown RBP12.71□□□□□ -0.37
SHPRH-201ENST00000275233 TTLL4Q14679 1199 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 RESP18Q5W5W9 173 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 ELMSAN1Q6PJG2 1045 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
SHPRH-201ENST00000275233 RAD54LQ92698 747 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
SHPRH-201ENST00000275233 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
SHPRH-201ENST00000275233 NARFQ9UHQ1 456 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 LCP1P13796 627 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 PEX19P40855 299 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 COASYQ13057 564 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 NECTIN1Q15223 517 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 RCSD1Q6JBY9 416 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 TOGARAM2Q6ZUX3 1019 aa12.71□□□□□ -0.37
SHPRH-201ENST00000275233 STMN1P16949 149 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 ATICP31939 592 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 LIFRP42702 1097 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-201ENST00000275233 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-201ENST00000275233 SIK2Q9H0K1 926 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 HSPA4LO95757 839 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 PAMP19021 973 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 AP3B2Q13367 1082 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-201ENST00000275233 ALCAMQ13740 583 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 NSUN6Q8TEA1 469 aaKnown RBP12.71□□□□□ -0.38
SHPRH-201ENST00000275233 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.38
SHPRH-201ENST00000275233 UTYO14607 1347 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 NPHP3-ACAD11A0A0J9YXS1 232 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 SNX2O60749 519 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 FCER1AP12319 257 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 GIMAP8Q8ND71 665 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-201ENST00000275233 TOPORSQ9NS56 1045 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CDC42BPGQ6DT37 1551 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 PRCPP42785 496 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 KIAA1755Q5JYT7 1200 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 LMBRD2Q68DH5 695 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-201ENST00000275233 NCLNQ969V3 563 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CYTH2Q99418 400 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 MROH7-TTC4A0A0A0MT08 1334 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CPB1P15086 417 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 TOB2Q14106 344 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
SHPRH-201ENST00000275233 UNC13DQ70J99 1090 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 A0A0G2JLW4 131 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CHEK2O96017 543 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CA4P22748 312 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 CCHCR1Q8TD31 782 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 SH2D3AQ9BRG2 576 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 KLC2Q9H0B6 622 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 GTSE1Q9NYZ3 720 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 SCINQ9Y6U3 715 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 IQANK1A0A1B0GTG1 560 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 TTI1O43156 1089 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 IGKV5-2P06315 115 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 GCKP35557 465 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 APBA1Q02410 837 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 PARD6BQ9BYG5 372 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 SFMBT1Q9UHJ3 866 aa12.7□□□□□ -0.38
SHPRH-201ENST00000275233 FAF1Q9UNN5 650 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-201ENST00000275233 SNX24Q9Y343 169 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms