RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ANTXR1Q9H6X2 564 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 LGR6Q9HBX8 967 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 DDX56Q9NY93 547 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CNOT8Q9UFF9 292 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 RPAP1Q9BWH6 1393 aaPredicted RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 TTLL1O95922 423 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 TFAMQ00059 246 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PTK2BQ14289 1009 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 IMPG1Q17R60 797 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 DAB2IPQ5VWQ8 1189 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 SYDE1Q6ZW31 735 aaPredicted RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ZNF555Q8NEP9 628 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 RNF139Q8WU17 664 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CEP170P1Q96L14 293 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PCIF1Q9H4Z3 704 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PFASO15067 1338 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 MYO1DO94832 1006 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ANXA13P27216 316 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 LIFRP42702 1097 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 MRPS35P82673 323 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CDKL3Q8IVW4 592 aaPredicted RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CMTM5Q96DZ9 223 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 EDEM3Q9BZQ6 932 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ASCC2Q9H1I8 757 aaPredicted RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 EPN3Q9H201 632 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 DNAJC12Q9UKB3 198 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 UGGT2Q9NYU1 1516 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PPP1R37O75864 691 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 EXT2Q93063 718 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 FTOQ9C0B1 505 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 EML4Q9HC35 981 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ADAM22Q9P0K1 906 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 INO80B-WBP1J3KQ70 363 aa9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 DIAPH2O60879 1101 aa9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 CCND2P30279 289 aa9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 BYSLQ13895 437 aaKnown RBP9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 CNBD2Q96M20 576 aa9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 HEXIM2Q96MH2 286 aaKnown RBP9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 INO80BQ9C086 356 aaPredicted RBP9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 ADD3Q9UEY8 706 aaKnown RBP9.27□□□□□ -0.92
SCUBE3-201ENST00000274938 PIK3R2O00459 728 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 ORC2Q13416 577 aaPredicted RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 RABGAP1LQ5R372 815 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 ITPRIPL1Q6GPH6 555 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 POTEAQ6S8J7 498 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 DNAJC10Q8IXB1 793 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 BRIP1Q9BX63 1249 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 WNT8AQ9H1J5 351 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 ZWILCHQ9H900 591 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 PVALEFA0A1B0GWK0 134 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 CFAP69A5D8W1 941 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 PSAPP07602 524 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 ULK4Q96C45 1275 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 KCNK16Q96T55 309 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 KLHL8Q9P2G9 620 aaPredicted RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 KCTD2Q14681 263 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 NAALADL2Q58DX5 795 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 NOP9Q86U38 636 aaKnown RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 EPAS1Q99814 870 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 CXorf56Q9H5V9 222 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 MPP6Q9NZW5 540 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 ANAPC7Q9UJX3 599 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 EEF2KMTQ96G04 330 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 NXF1Q9UBU9 619 aaKnown RBP9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
SCUBE3-201ENST00000274938 hCG_2014768A0A024R1R8 64 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 ANKRD65E5RJM6 399 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 ATP1A3P13637 1013 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 MDH1P40925 334 aaKnown RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 LRRC8EQ6NSJ5 796 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PLD3Q8IV08 490 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 SLC4A1P02730 911 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CNGA3Q16281 694 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 HSPH1Q92598 858 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 AKT3Q9Y243 479 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 TSC22D4Q9Y3Q8 395 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PRR23D1E9PI22 279 aaPredicted RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 ADCY3O60266 1144 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 WBP4O75554 376 aaKnown RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PRR23D2P0DMB1 279 aaPredicted RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CYP2C19P33261 490 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 HADHAP40939 763 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CCNA1P78396 465 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 RPF1Q9H9Y2 349 aaKnown RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 MEIS1O00470 390 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 KRT7P08729 469 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CACNB1Q02641 598 aaPredicted RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CATSPER3Q86XQ3 398 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms