RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 NPY5RQ15761 445 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 E2F4Q16254 413 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 ZNF568Q3ZCX4 644 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 TTI2Q6NXR4 508 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 APBB1IPQ7Z5R6 666 aaPredicted RBP12.04□□□□□ -0.48
SFXN5-201ENST00000272433 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
SFXN5-201ENST00000272433 GPRC5AQ8NFJ5 357 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 VPS33BQ9H267 617 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 CDC23Q9UJX2 597 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 PDXKO00764 312 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 SERPING1P05155 500 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 NSFP46459 744 aaKnown RBP12.04□□□□□ -0.48
SFXN5-201ENST00000272433 KCNA1Q09470 495 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 TRIM50Q86XT4 487 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 KRT222Q8N1A0 295 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 ELMO3Q96BJ8 720 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 ZNF653Q96CK0 615 aa12.04□□□□□ -0.48
SFXN5-201ENST00000272433 SLITRK3O94933 977 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 APBA1Q02410 837 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 PGM5Q15124 567 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 ZNF354CQ86Y25 554 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 UBL4BQ8N7F7 174 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 MRRFQ96E11 262 aaKnown RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 MTUS1Q9ULD2 1270 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 RIPK3Q9Y572 518 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 CSPG5O95196 566 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 LONRF2Q1L5Z9 754 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 MSANTD4Q8NCY6 345 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 DYDC1Q8WWB3 177 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 TARS2Q9BW92 718 aaKnown RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 RGS17Q9UGC6 210 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 PACSIN2Q9UNF0 486 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 TAF1P21675 1872 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 HSF2BPO75031 334 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 DGAT1O75907 488 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 PLEKP08567 350 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 GTF2F1P35269 517 aaKnown RBP eCLIP12.03□□□□□ -0.481e-7■■■□□ 15.5
SFXN5-201ENST00000272433 GUCY2FP51841 1108 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 SCFD1Q8WVM8 642 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 POLR3CQ9BUI4 534 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 TSPYL1Q9H0U9 437 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 SLC38A10Q9HBR0 1119 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
SFXN5-201ENST00000272433 HSPBP1Q9NZL4 362 aa12.03□□□□□ -0.48
SFXN5-201ENST00000272433 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.48
SFXN5-201ENST00000272433 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.48
SFXN5-201ENST00000272433 LY6KQ17RY6 165 aa12.02□□□□□ -0.48
SFXN5-201ENST00000272433 CCDC170Q8IYT3 715 aa12.02□□□□□ -0.48
SFXN5-201ENST00000272433 WDR18Q9BV38 432 aa12.02□□□□□ -0.48
SFXN5-201ENST00000272433 COX16Q9P0S2 106 aa12.02□□□□□ -0.48
SFXN5-201ENST00000272433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.02□□□□□ -0.48
SFXN5-201ENST00000272433 NHSL1Q5SYE7 1610 aa12.02□□□□□ -0.48
SFXN5-201ENST00000272433 KRIT1O00522 736 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 SND1Q7KZF4 910 aaKnown RBP eCLIP12.02□□□□□ -0.49
SFXN5-201ENST00000272433 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 CHST13Q8NET6 341 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 CEP72Q9P209 647 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 AGO2Q9UKV8 859 aaKnown RBP12.02□□□□□ -0.49
SFXN5-201ENST00000272433 NCK2O43639 380 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 ATP9AO75110 1047 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 IFNB1P01574 187 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 SNHG28P0DPA3 235 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 KAZNQ674X7 775 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 CBWD1Q9BRT8 395 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 DPH5Q9H2P9 285 aa12.02□□□□□ -0.49
SFXN5-201ENST00000272433 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
SFXN5-201ENST00000272433 BZW2Q9Y6E2 419 aaKnown RBP12.02□□□□□ -0.49
SFXN5-201ENST00000272433 C6orf222P0C671 652 aaPredicted RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 PLS3P13797 630 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 ATF7P17544 494 aaPredicted RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 ITGB5P18084 799 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 EMC2Q15006 297 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 ECM1Q16610 540 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 DNAAF5Q86Y56 855 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 UBLCP1Q8WVY7 318 aaPredicted RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 ANKRD36BP1Q96IX9 119 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 MMTAG2Q9BU76 263 aaKnown RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 RANBP17Q9H2T7 1088 aaKnown RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 CHORDC1Q9UHD1 332 aaPredicted RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 DDX41Q9UJV9 622 aaKnown RBP12.01□□□□□ -0.49
SFXN5-201ENST00000272433 CAPN11Q9UMQ6 739 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
SFXN5-201ENST00000272433 ASB14A6NK59 587 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms