RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 MAMDC4Q6UXC1 1216 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 FAM114A1Q8IWE2 563 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 GLG1Q92896 1179 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 DRC1Q96MC2 740 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 FLRT1Q9NZU1 646 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
CAPN9-201ENST00000271971 IMPACTQ9P2X3 320 aa13.77□□□□□ -0.21
CAPN9-201ENST00000271971 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
CAPN9-201ENST00000271971 VGLL3A8MV65 326 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 KIF2AO00139 706 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-201ENST00000271971 CLIC2O15247 247 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 EIF3DO15371 548 aaKnown RBP eCLIP13.76□□□□□ -0.21
CAPN9-201ENST00000271971 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 NR2F2P24468 414 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 CTGFP29279 349 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 UBXN1Q04323 297 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 BRCA2P51587 3418 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 SLC16A4O15374 487 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 ADCY6O43306 1168 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 PPP1R37O75864 691 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 DGAT1O75907 488 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 MAP2K5Q13163 448 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 EMC2Q15006 297 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 CCL14Q16627 93 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 MIIPQ5JXC2 388 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 PRAMEF19Q5SWL8 479 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 AFAP1L1Q8TED9 768 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
CAPN9-201ENST00000271971 AZI2Q9H6S1 392 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
CAPN9-201ENST00000271971 TYW1Q9NV66 732 aaKnown RBP13.76□□□□□ -0.21
CAPN9-201ENST00000271971 CYP2B6P20813 491 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TM4SF4P48230 202 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
CAPN9-201ENST00000271971 ADAM9Q13443 819 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 FOXR2Q6PJQ5 311 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 HHIPL1Q96JK4 782 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 NOC4LQ9BVI4 516 aaKnown RBP13.75□□□□□ -0.21
CAPN9-201ENST00000271971 STRA6Q9BX79 667 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TRAF3IP3Q9Y228 551 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 EVPLQ92817 2033 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 CCDC169A6NNP5 214 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TISP43B9A030 160 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 PDXKO00764 312 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 GSDMDP57764 484 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TBX2Q13207 712 aaPredicted RBP13.75□□□□□ -0.21
CAPN9-201ENST00000271971 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 ARHGAP39Q9C0H5 1083 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
CAPN9-201ENST00000271971 ADGRA3Q8IWK6 1321 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 DNAH12Q6ZR08 3092 aa13.75□□□□□ -0.21
CAPN9-201ENST00000271971 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CALUO43852 315 aaPredicted RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 LGR5O75473 907 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 FGFR1OPO95684 399 aaKnown RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 NR3C1P04150 777 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 SMPD1P17405 629 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 NPTX2P47972 431 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 DMP1Q13316 513 aaPredicted RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 HAUS6Q7Z4H7 955 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 ZC3H3Q8IXZ2 948 aaKnown RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 LENG1Q96BZ8 264 aaPredicted RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 PCDHB13Q9Y5F0 798 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 UBE4BO95155 1302 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CA12O43570 354 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 GH1P01241 217 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 ZNF286BP0CG31 522 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CYP2C19P33261 490 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CASP4P49662 377 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 KLK7P49862 253 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 ADKP55263 362 aaKnown RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CCZ1BP86790 482 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CCZ1P86791 482 aaPredicted RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 MCPH1Q8NEM0 835 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 NIFKQ9BYG3 293 aaKnown RBP13.74□□□□□ -0.21
CAPN9-201ENST00000271971 SLC5A4Q9NY91 659 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
CAPN9-201ENST00000271971 CETN3O15182 167 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 NCKAP1LP55160 1127 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 SYCP3Q8IZU3 236 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms