RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 CD209Q9NNX6 404 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 FEM1BQ9UK73 627 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 STRIP2Q9ULQ0 834 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 RASA4BC9J798 803 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 MYO1CO00159 1063 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 COPEO14579 308 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 RASA4O43374 803 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ZSCAN20P17040 1043 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 FOXO4P98177 505 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 KRT76Q01546 638 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 RTKN2Q8IZC4 609 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CPVLQ9H3G5 476 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 NGRNQ9NPE2 291 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ORC6Q9Y5N6 252 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 COL15A1P39059 1388 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 FAM187AA6NFU0 413 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L10C9JJH3 530 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 KCNJ6P48051 423 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 RSBN1LQ6PCB5 846 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 EEPD1Q7L9B9 569 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 BANK1Q8NDB2 785 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 DHX38Q92620 1227 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 DYDC2Q96IM9 177 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 TAF1DQ9H5J8 278 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 TMEM260Q9NX78 707 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 NOP53Q9NZM5 478 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CAPN11Q9UMQ6 739 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ABCB11O95342 1321 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 TARSL2A2RTX5 802 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 GNGT2O14610 69 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 PPFIA2O75334 1257 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 PPP2R2AP63151 447 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 KLHL38Q2WGJ6 581 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CIAPIN1Q6FI81 312 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 WDR75Q8IWA0 830 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 RUBCNQ92622 972 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 BEGAINQ9BUH8 593 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 TRAIPQ9BWF2 469 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 SLITRK6Q9H5Y7 841 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 MAGED2Q9UNF1 606 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CDC42BPAQ5VT25 1732 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 QRICH2Q9H0J4 1663 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 SNAP23O00161 211 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 DNAJC8O75937 253 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 KRT38O76015 456 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 MX2P20592 715 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 VAMP7P51809 220 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 NBPF9Q3BBW0 867 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 KLC3Q6P597 504 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ZNF564Q8TBZ8 553 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ALKQ9UM73 1620 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CLDN3O15551 220 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ZNF18P17022 549 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 MAGOHP61326 146 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CDO1Q16878 200 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 MYLK4Q86YV6 388 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 SLC44A5Q8NCS7 719 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 GIMAP8Q8ND71 665 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 INTS2Q9H0H0 1204 aaKnown RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 TMEM60Q9H2L4 133 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 FAM96AQ9H5X1 160 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 ASNSD1Q9NWL6 643 aa10.93□□□□□ -0.66
LAMA3-201ENST00000269217 FBXO2Q9UK22 296 aaPredicted RBP10.93□□□□□ -0.66
LAMA3-201ENST00000269217 CTIFO43310 598 aaKnown RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 DRAP1Q14919 205 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 TAF1BQ53T94 588 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 MMS22LQ6ZRQ5 1243 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 GSPT2Q8IYD1 628 aaKnown RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 RMDN3Q96TC7 470 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 FIS1Q9Y3D6 152 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 MORC2Q9Y6X9 1032 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 PFASO15067 1338 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 MYO3BQ8WXR4 1341 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 ZNF335Q9H4Z2 1342 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 GMNCA6NCL1 334 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 TBXAS1P24557 533 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 SFNP31947 248 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 TMPRSS15P98073 1019 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 RABL6Q3YEC7 729 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 EPM2AIP1Q7L775 607 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 TTC17Q96AE7 1141 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 NUP85Q9BW27 656 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 ARHGEF40Q8TER5 1519 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 NCK2O43639 380 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 P4HBP07237 508 aaKnown RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 XPAP23025 273 aaPredicted RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 PHEXP78562 749 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 HDLBPQ00341 1268 aaKnown RBP10.92□□□□□ -0.66
LAMA3-201ENST00000269217 IL1RL1Q01638 556 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 PDXDC1Q6P996 788 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 STOX1Q6ZVD7 989 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 THNSL1Q8IYQ7 743 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 SYNE4Q8N205 404 aa10.92□□□□□ -0.66
LAMA3-201ENST00000269217 RNF139Q8WU17 664 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms