RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 DMP1Q13316 513 aaPredicted RBP15.53■□□□□ 0.08
SS18-201ENST00000269137 ADAM9Q13443 819 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 EMC2Q15006 297 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 ZSCAN30Q86W11 494 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 CREBRFQ8IUR6 639 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 GOLGA5Q8TBA6 731 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 ZKSCAN5Q9Y2L8 839 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.084e-6■■■□□ 17.6
SS18-201ENST00000269137 ZMYM2Q9UBW7 1377 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 MGAMO43451 1857 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 AOC2O75106 756 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 PPFIA4O75335 1185 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 HOXD8P13378 290 aaPredicted RBP15.52■□□□□ 0.08
SS18-201ENST00000269137 SMPD1P17405 629 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 NR2F2P24468 414 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 NPTX2P47972 431 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 PLCB4Q15147 1175 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 HS2ST1Q7LGA3 356 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 HAUS6Q7Z4H7 955 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 ZNF784Q8NCA9 323 aaPredicted RBP15.52■□□□□ 0.08
SS18-201ENST00000269137 TMEM174Q8WUU8 243 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 SLC7A3Q8WY07 619 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 KCNN1Q92952 543 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 HVCN1Q96D96 273 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 GBP3Q9H0R5 595 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 TMEM206Q9H813 350 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 FLRT1Q9NZU1 646 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.08
SS18-201ENST00000269137 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.08
SS18-201ENST00000269137 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.52■□□□□ 0.07
SS18-201ENST00000269137 NR3C1P04150 777 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 CYP2B6P20813 491 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 SCP2P22307 547 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 CTGFP29279 349 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 DNM2P50570 870 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 FCGRTP55899 365 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 SNRPFP62306 86 aaKnown RBP15.52■□□□□ 0.07
SS18-201ENST00000269137 GJC2Q5T442 439 aaPredicted RBP15.52■□□□□ 0.07
SS18-201ENST00000269137 TRIM50Q86XT4 487 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 EXOC8Q8IYI6 725 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 TMEM161BQ8NDZ6 487 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 AFG1LQ8WV93 481 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 ACCSQ96QU6 501 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 KCNF1Q9H3M0 494 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 ERAP1Q9NZ08 941 aa15.52■□□□□ 0.07
SS18-201ENST00000269137 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.52■□□□□ 0.07
SS18-201ENST00000269137 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.07
SS18-201ENST00000269137 A0A1W2PQC6 194 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 HBP1O60381 514 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 MAFO75444 373 aaPredicted RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 ZNF865P0CJ78 1059 aaPredicted RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 XRCC5P13010 732 aaKnown RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 ABCD1P33897 745 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 CLCN1P35523 988 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 ARL2P36404 184 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 UBXN1Q04323 297 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 MYBPC2Q14324 1141 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 MIIPQ5JXC2 388 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 LRRC8AQ8IWT6 810 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 CACTINQ8WUQ7 758 aaKnown RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 BSNDQ8WZ55 320 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 IFT74Q96LB3 600 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 ZNF830Q96NB3 372 aaPredicted RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 NOC4LQ9BVI4 516 aaKnown RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 CFHR5Q9BXR6 569 aa15.51■□□□□ 0.07
SS18-201ENST00000269137 POLR3FQ9H1D9 316 aaPredicted RBP15.51■□□□□ 0.07
SS18-201ENST00000269137 ZBTB42B2RXF5 422 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 H0YCG3 227 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 SLC16A4O15374 487 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 SLC16A3O15427 465 aaKnown RBP15.5■□□□□ 0.07
SS18-201ENST00000269137 GAS2O43903 313 aaKnown RBP15.5■□□□□ 0.07
SS18-201ENST00000269137 ECM2O94769 699 aaPredicted RBP15.5■□□□□ 0.07
SS18-201ENST00000269137 LGALS2P05162 132 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 PSMC4P43686 418 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 SOX10P56693 466 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 LACTBP83111 547 aaPredicted RBP15.5■□□□□ 0.07
SS18-201ENST00000269137 TNFAIP2Q03169 654 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 CCL14Q16627 93 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 VWA3BQ502W6 1294 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 SLC9A9Q8IVB4 645 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 KMT5AQ9NQR1 393 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 AGPAT3Q9NRZ7 376 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 DMAC2Q9NW81 257 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 CCDC169A6NNP5 214 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 YY1P25490 414 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 MARK3P27448 753 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 PPP2R5AQ15172 486 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 PTPN21Q16825 1174 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 CCDC40Q4G0X9 1142 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 ARMCX5Q6P1M9 558 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 KSR1Q8IVT5 923 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 TRIM59Q8IWR1 403 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 C12orf56Q8IXR9 622 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 SYCP3Q8IZU3 236 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 OR6J1Q8NGC5 347 aa15.5■□□□□ 0.07
SS18-201ENST00000269137 JPH2Q9BR39 696 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms