RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PPM1NQ8N819 430 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 PARVBQ9HBI1 364 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 ABL2P42684 1182 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 ABCC12Q96J65 1359 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 PLCH2O75038 1416 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 AP1G2O75843 785 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 KRT28Q7Z3Y7 464 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 V9GYQ6 96 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 ESYT3A0FGR9 886 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 KPNA7A9QM74 516 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 VPS39Q96JC1 886 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 NPHS2Q9NP85 383 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 DCDC2Q9UHG0 476 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 EYA2O00167 538 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 HIBADHP31937 336 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 GPS1Q13098 491 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 ULK4Q96C45 1275 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 TMA16Q96EY4 203 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 EIF2B2P49770 351 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 PMS2P54278 862 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 TRIP4Q15650 581 aaPredicted RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 PPP6R3Q5H9R7 873 aaPredicted RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 A0A0D9SFI3 127 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 SARM1Q6SZW1 724 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 SIX6OS1Q8N1H7 587 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 KBTBD3Q8NAB2 608 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHFR-201ENST00000266880 BNIP3LO60238 219 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 CCDC81Q6ZN84 652 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 MTERF3Q96E29 417 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 EPN3Q9H201 632 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 PYGMP11217 842 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 ALAS1P13196 640 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 LRRC47Q8N1G4 583 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 ATXN7L3BQ96GX2 97 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 SLC12A6Q9UHW9 1150 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHFR-201ENST00000266880 EPC1Q9H2F5 836 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 MRPL47Q9HD33 250 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 SFI1A8K8P3 1242 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 MED7O43513 233 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 AKAP10O43572 662 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 PSMC2P35998 433 aaKnown RBP11.87□□□□□ -0.51
CHFR-201ENST00000266880 SCRN1Q12765 414 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 FAPQ12884 760 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 SLFNL1Q499Z3 407 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 Q4G0T1 1027 aa11.87□□□□□ -0.51
CHFR-201ENST00000266880 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 PAPOLAP51003 745 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 KHDRBS2Q5VWX1 349 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 RGS12O14924 1447 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 FASTKD1Q53R41 847 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 ELMSAN1Q6PJG2 1045 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 FAM89AQ96GI7 184 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 FAM81BQ96LP2 452 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 MFAP3LO75121 409 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 OR6B2Q6IFH4 312 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 EFHD2Q96C19 240 aaPredicted RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 TRIM45Q9H8W5 580 aaPredicted RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 SAMSN1Q9NSI8 373 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 TMEM161AQ9NX61 479 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 KRT38O76015 456 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 SMARCA1P28370 1054 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 BFSP2Q13515 415 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 TRIM71Q2Q1W2 868 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 WDR48Q8TAF3 677 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 PIK3R2O00459 728 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 KRT39Q6A163 491 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 OTUB1Q96FW1 271 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms