RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ARHGEF35A5YM69 484 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 RNF40O75150 1001 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 SYF2O95926 243 aaKnown RBP14.08□□□□□ -0.16
CPSF6-201ENST00000266679 PSMC2P35998 433 aaKnown RBP14.08□□□□□ -0.16
CPSF6-201ENST00000266679 JAM2P57087 298 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 PLS1Q14651 629 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
CPSF6-201ENST00000266679 RIN2Q8WYP3 895 aaPredicted RBP14.08□□□□□ -0.16
CPSF6-201ENST00000266679 BORCS6Q96GS4 357 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 ZNF341Q9BYN7 854 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 PSD3Q9NYI0 1048 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 STIM2Q9P246 746 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 BZW2Q9Y6E2 419 aaKnown RBP14.08□□□□□ -0.16
CPSF6-201ENST00000266679 ASTN2O75129 1339 aaPredicted RBP14.08□□□□□ -0.16
CPSF6-201ENST00000266679 UBE4BO95155 1302 aa14.08□□□□□ -0.16
CPSF6-201ENST00000266679 IPO5O00410 1097 aaKnown RBP14.07□□□□□ -0.16
CPSF6-201ENST00000266679 PPP1R12BO60237 982 aaPredicted RBP14.07□□□□□ -0.16
CPSF6-201ENST00000266679 GFPT2O94808 682 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 INPP5BP32019 993 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 NOP2P46087 812 aaKnown RBP14.07□□□□□ -0.16
CPSF6-201ENST00000266679 RNASE9P60153 205 aaKnown RBP14.07□□□□□ -0.16
CPSF6-201ENST00000266679 PTPROQ16827 1216 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 ODR4Q5SWX8 454 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 RUBCNQ92622 972 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 HOOK2Q96ED9 719 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 FIZ1Q96SL8 496 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 GOLPH3Q9H4A6 298 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 PLEKHA4Q9H4M7 779 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 NAGPAQ9UK23 515 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 PLA2G6O60733 806 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 HIP1RO75146 1068 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 TRIM49P0CI25 452 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 TRIM49CP0CI26 452 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 GGCXP38435 758 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 PRKCIP41743 596 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 ZNF131P52739 623 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 MAEAQ7L5Y9 396 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 HS2ST1Q7LGA3 356 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 MXRA8Q9BRK3 442 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 AGPAT3Q9NRZ7 376 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 COL20A1Q9P218 1284 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 SEL1LQ9UBV2 794 aa14.07□□□□□ -0.16
CPSF6-201ENST00000266679 GTPBP10A4D1E9 387 aaKnown RBP14.06□□□□□ -0.16
CPSF6-201ENST00000266679 BTNL10A8MVZ5 291 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 NFIBO00712 420 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 TBC1D12O60347 775 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 ITGB5P18084 799 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 HNRNPH2P55795 449 aaKnown RBP14.06□□□□□ -0.16
CPSF6-201ENST00000266679 NFIL3Q16649 462 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 C10orf76Q5T2E6 689 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 ALKBH5Q6P6C2 394 aaKnown RBP14.06□□□□□ -0.16
CPSF6-201ENST00000266679 STXBP4Q6ZWJ1 553 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 MIER3Q7Z3K6 550 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 TAF4BQ92750 862 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 ODF2LQ9ULJ1 636 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 FLOT1O75955 427 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 CELF2O95319 508 aaKnown RBP14.06□□□□□ -0.16
CPSF6-201ENST00000266679 ICAM1P05362 532 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 MUTP22033 750 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 FMO5P49326 533 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 HSD17B4P51659 736 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 NBPF9Q3BBW0 867 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 B3GNT9Q6UX72 402 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 U2AF1L4Q8WU68 220 aaKnown RBP14.06□□□□□ -0.16
CPSF6-201ENST00000266679 INPP4AQ96PE3 977 aaPredicted RBP14.06□□□□□ -0.16
CPSF6-201ENST00000266679 CALCOCO1Q9P1Z2 691 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 RNF14Q9UBS8 474 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 FRMD4BQ9Y2L6 1034 aa14.06□□□□□ -0.16
CPSF6-201ENST00000266679 K7ENM7 598 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 STAT1P42224 750 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 DGKZQ13574 1117 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 CBWD6Q4V339 395 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 CBWD3Q5JTY5 395 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 CBWD5Q5RIA9 395 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 FKBP1CQ5VVH2 108 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 CYP4F22Q6NT55 531 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 FAM83AQ86UY5 434 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 VPS36Q86VN1 386 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 SYCP3Q8IZU3 236 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 KRT12Q99456 494 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 ZNF536O15090 1300 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 FAM170AA1A519 330 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 GOLGA6BA6NDN3 693 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 ADM5C9JUS6 153 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 AGPSO00116 658 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 DDX3XO00571 662 aaKnown RBP eCLIP14.05□□□□□ -0.164e-13■□□□□ 9.3
CPSF6-201ENST00000266679 KCNK3O14649 394 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 ASNSP08243 561 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 FERP16591 822 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 GUCY2CP25092 1073 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 EPHB4P54760 987 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 MYL7Q01449 175 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 MAPK7Q13164 816 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms