RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 CLIC2O15247 247 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 H2AFZP0C0S5 128 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 BMP3P12645 472 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 FERP16591 822 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 CCT5P48643 541 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 RNASE9P60153 205 aaKnown RBP13.57□□□□□ -0.24
BEST3-201ENST00000266661 PPATQ06203 517 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 UAP1Q16222 522 aaPredicted RBP13.57□□□□□ -0.24
BEST3-201ENST00000266661 ABCB5Q2M3G0 1257 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 USH1GQ495M9 461 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 B3GNT9Q6UX72 402 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 H2AFVQ71UI9 128 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 SLC5A5Q92911 643 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
BEST3-201ENST00000266661 STRA6Q9BX79 667 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 POLD4Q9HCU8 107 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 ZNRF3Q9ULT6 936 aa13.57□□□□□ -0.24
BEST3-201ENST00000266661 NCANO14594 1321 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 FRMPD4Q14CM0 1322 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 RBBP6Q7Z6E9 1792 aaKnown RBP13.56□□□□□ -0.24
BEST3-201ENST00000266661 GDF11O95390 407 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 GCNT3O95395 438 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 MUTP22033 750 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
BEST3-201ENST00000266661 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 PPP2R5CQ13362 524 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 CUL1Q13616 776 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 DCAF17Q5H9S7 520 aaPredicted RBP13.56□□□□□ -0.24
BEST3-201ENST00000266661 KIAA0825Q8IV33 1275 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 KLHL7Q8IXQ5 586 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 RNPC3Q96LT9 517 aaKnown RBP13.56□□□□□ -0.24
BEST3-201ENST00000266661 RUFY1Q96T51 708 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 PAGR1Q9BTK6 254 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 NEUROG2Q9H2A3 272 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 PRR12Q9ULL5 1215 aa13.56□□□□□ -0.24
BEST3-201ENST00000266661 SRRM3A6NNA2 597 aaPredicted RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 ANKRD65E5RJM6 399 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 CCDC188H7C350 402 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 PGRMC1O00264 195 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 CEP104O60308 925 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 NMT1P30419 496 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 PSMC2P35998 433 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 STAT1P42224 750 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 PDCLQ13371 301 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 ATP6V1G3Q96LB4 118 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 STK33Q9BYT3 514 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 UBE4BO95155 1302 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 POLR2AP24928 1970 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 F8VZ95 297 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 RAD21O60216 631 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 EVI5O60447 810 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 ENTPD3O75355 529 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 SOX5P35711 763 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 NOP2P46087 812 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 FMO5P49326 533 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 GALCP54803 685 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 KIAA1755Q5JYT7 1200 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 KCTD16Q68DU8 428 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 FAM186BQ8IYM0 893 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 PIGOQ8TEQ8 1089 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 LMBR1Q8WVP7 490 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 WRAP73Q9P2S5 460 aaPredicted RBP13.55□□□□□ -0.24
BEST3-201ENST00000266661 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
BEST3-201ENST00000266661 HMGB1P1B2RPK0 211 aaPredicted RBP13.54□□□□□ -0.24
BEST3-201ENST00000266661 ZBTB39O15060 712 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 PPP1R37O75864 691 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 GH2P01242 217 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 ITGA4P13612 1032 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 YY1P25490 414 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 HSD17B3P37058 310 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
BEST3-201ENST00000266661 TCERG1LQ5VWI1 586 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 TTC19Q6DKK2 380 aaPredicted RBP13.54□□□□□ -0.24
BEST3-201ENST00000266661 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 PACS2Q86VP3 889 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 LMO3Q8TAP4 145 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 U2AF1L4Q8WU68 220 aaKnown RBP13.54□□□□□ -0.24
BEST3-201ENST00000266661 FAM107BQ9H098 131 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 PLAAQ9Y263 795 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 FAM169AQ9Y6X4 670 aa13.54□□□□□ -0.24
BEST3-201ENST00000266661 ATXN2Q99700 1313 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms