RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 OTOP1Q7RTM1 612 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 SYCE1Q8N0S2 351 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 DNERQ8NFT8 737 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 PNMA5Q96PV4 448 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 GPRC5CQ9NQ84 441 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 MTUS1Q9ULD2 1270 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 NUB1Q9Y5A7 615 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 LRRC71Q8N4P6 559 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 RAET1EQ8TD07 263 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 MRPL4Q9BYD3 311 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 ABHD10Q9NUJ1 306 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 SAR1BQ9Y6B6 198 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 XPOTO43592 962 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 USP2O75604 605 aaPredicted RBP15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 TERF1P54274 439 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 TAF12Q16514 161 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 ERO1AQ96HE7 468 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 TMEM132BQ14DG7 1078 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 SURF1Q15526 300 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 A0A1B0GTH6 734 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 LRRC53A6NM62 1247 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 NEFHP12036 1026 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 NSFP46459 744 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 IFT81Q8WYA0 676 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 AGO2Q9UKV8 859 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 SPDYE16A6NNV3 312 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 EML1O00423 815 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 OATP04181 439 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 SERPING1P05155 500 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 TAX1BP1Q86VP1 789 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 HOOK3Q86VS8 718 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 HAS1Q92839 578 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 ZBTB9Q96C00 473 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 KIFC3Q9BVG8 833 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 AMFRQ9UKV5 643 aa15.69■□□□□ 0.1
PDLIM2-201ENST00000265810 KIF11P52732 1056 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 SNX16P57768 344 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 SCARA5Q6ZMJ2 495 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 FRMD5Q7Z6J6 570 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 CCDC170Q8IYT3 715 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 TNFRSF25Q93038 417 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 RASAL2Q9UJF2 1139 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 PIK3CDO00329 1044 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 CYP3A4P08684 503 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 ERVK-9P63128 1117 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 ERVK-24P63145 666 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 TUBB2AQ13885 445 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 GIT2Q14161 759 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 SPOUT1Q5T280 376 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 IPO4Q8TEX9 1081 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 ABCA3Q99758 1704 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 TUBB2BQ9BVA1 445 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 CEP72Q9P209 647 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 THAP12O43422 761 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 KCNA3P22001 575 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 SLC35F6Q8N357 371 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 FERMT1Q9BQL6 677 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 CCDC113Q9H0I3 377 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 HESX1Q9UBX0 185 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 SLITRK3O94933 977 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 MAPK4P31152 587 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 EFNA5P52803 228 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 RRP1BQ14684 758 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 GPD1LQ8N335 351 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 SLC5A5Q92911 643 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 CYP26B1Q9NR63 512 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 HSPBP1Q9NZL4 362 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 PLIN4Q96Q06 1357 aa15.68■□□□□ 0.1
PDLIM2-201ENST00000265810 ENC1O14682 589 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 SUPT20HL2P0C7V6 817 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 ALDH5A1P51649 535 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 TNFAIP2Q03169 654 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 SEPT7Q16181 437 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 EDRF1Q3B7T1 1238 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 TUBB4BP68371 445 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 IL17AQ16552 155 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 LMBRD2Q68DH5 695 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 TWF2Q6IBS0 349 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 CYP39A1Q9NYL5 469 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 RBAKQ9NYW8 714 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 LTBP3Q9NS15 1303 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 A0A1W2PQC6 194 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 PRKCBP05771 671 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 ACOT2P49753 483 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 MXD4Q14582 209 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 NR1I3Q14994 352 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 LY6KQ17RY6 165 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 NAP1L3Q99457 506 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 HBP1O60381 514 aa15.67■□□□□ 0.1
PDLIM2-201ENST00000265810 CIITAP33076 1130 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms