RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 KANK3Q6NY19 840 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 RUFY4Q6ZNE9 571 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 IFNLR1Q8IU57 520 aaPredicted RBP15.85■□□□□ 0.13
SSBP1-201ENST00000265304 KIFAP3Q92845 792 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 NOC4LQ9BVI4 516 aaKnown RBP15.85■□□□□ 0.13
SSBP1-201ENST00000265304 NFKBIZQ9BYH8 718 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 SERTAD1Q9UHV2 236 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
SSBP1-201ENST00000265304 NR1I2O75469 434 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 CLTBP09497 229 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 IGBP1P78318 339 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 AMPD3Q01432 767 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 MGAT3Q09327 533 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 DRP2Q13474 957 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 TRMT1LQ7Z2T5 733 aaKnown RBP15.84■□□□□ 0.13
SSBP1-201ENST00000265304 RASSF8Q8NHQ8 419 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 SPATA20Q8TB22 786 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 DHX58Q96C10 678 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 PAGE5Q96GU1 130 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 TRIM9Q9C026 710 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 ADAMTS10Q9H324 1103 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 KCNG1Q9UIX4 513 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 LTBP2Q14767 1821 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 SCN5AQ14524 2016 aa15.84■□□□□ 0.13
SSBP1-201ENST00000265304 GPR32O75388 356 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 PARNO95453 639 aaKnown RBP15.83■□□□□ 0.12
SSBP1-201ENST00000265304 CKBP12277 381 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 SCP2P22307 547 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 CHMP4BP1P59074 171 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 EHHADHQ08426 723 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 BFSP2Q13515 415 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 ZNF410Q86VK4 478 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 GPBP1Q86WP2 473 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 DNAJB3Q8WWF6 145 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 SPIRE2Q8WWL2 714 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 PRPF31Q8WWY3 499 aaKnown RBP15.83■□□□□ 0.12
SSBP1-201ENST00000265304 PSPC1Q8WXF1 523 aaKnown RBP15.83■□□□□ 0.12
SSBP1-201ENST00000265304 DDX12PQ92771 950 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 ZBTB10Q96DT7 871 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.12
SSBP1-201ENST00000265304 ATP11BQ9Y2G3 1177 aa15.83■□□□□ 0.12
SSBP1-201ENST00000265304 PVALEFA0A1B0GWK0 134 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 USO1O60763 962 aaKnown RBP15.82■□□□□ 0.12
SSBP1-201ENST00000265304 CHRNA1P02708 482 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 GLRA2P23416 452 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 GPC3P51654 580 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 CLCN3P51790 818 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 MRPS6P82932 125 aaKnown RBP15.82■□□□□ 0.12
SSBP1-201ENST00000265304 LAMTOR4Q0VGL1 99 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 CEP57L1Q8IYX8 460 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 LRRC71Q8N4P6 559 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 METTL13Q8N6R0 699 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-201ENST00000265304 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
SSBP1-201ENST00000265304 FIZ1Q96SL8 496 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 MAP7D2Q96T17 732 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 REEP2Q9BRK0 252 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 SUGCTQ9HAC7 445 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 IFT122Q9HBG6 1241 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 BMP2KQ9NSY1 1161 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-201ENST00000265304 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 NOD1Q9Y239 953 aa15.82■□□□□ 0.12
SSBP1-201ENST00000265304 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-201ENST00000265304 GTPBP6O43824 516 aaPredicted RBP15.81■□□□□ 0.12
SSBP1-201ENST00000265304 HIP1RO75146 1068 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 TIMP1P01033 207 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 MAPTP10636 758 aaKnown RBP15.81■□□□□ 0.12
SSBP1-201ENST00000265304 SELPP16109 830 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 NAMPTP43490 491 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 CRYBB1P53674 252 aaPredicted RBP15.81■□□□□ 0.12
SSBP1-201ENST00000265304 DPYDQ12882 1025 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 GPNMBQ14956 572 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 PCBP1Q15365 356 aaKnown RBP eCLIP15.81■□□□□ 0.12
SSBP1-201ENST00000265304 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 TMEM143Q96AN5 459 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 VWCEQ96DN2 955 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 CELF4Q9BZC1 486 aaKnown RBP15.81■□□□□ 0.12
SSBP1-201ENST00000265304 ST6GALNAC4Q9H4F1 302 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 OLFML3Q9NRN5 406 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 TMEM39AQ9NV64 488 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 DACT1Q9NYF0 836 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
SSBP1-201ENST00000265304 KLRC4O43908 158 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 CXCL10P02778 98 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
SSBP1-201ENST00000265304 IQCF3P0C7M6 154 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 PLS3P13797 630 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 GAP43P17677 238 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 PTMSP20962 102 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 SARSP49591 514 aaKnown RBP15.8■□□□□ 0.12
SSBP1-201ENST00000265304 PTENP60484 403 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 MBTPS1Q14703 1052 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 PPP2R5AQ15172 486 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 ZNF618Q5T7W0 954 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 NT5DC1Q5TFE4 455 aa15.8■□□□□ 0.12
SSBP1-201ENST00000265304 CDCA2Q69YH5 1023 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms