RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RARGP13631 454 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 ATP2A2P16615 1042 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 CCNHP51946 323 aaPredicted RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 PPATQ06203 517 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 KNOP1Q1ED39 458 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 USP17L2Q6R6M4 530 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 KIRREL3Q8IZU9 778 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 RXFP1Q9HBX9 757 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 LDHCP07864 332 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 MSH2P43246 934 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 KCNJ2P63252 427 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 ECM1Q16610 540 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 SLC4A8Q2Y0W8 1093 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 ZDHHC24Q6UX98 284 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 TRMT10CQ7L0Y3 403 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 EYA3Q99504 573 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 PCYOX1Q9UHG3 505 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 SMIM23A6NLE4 172 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 KRT13P13646 458 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 IFNAR2P48551 515 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 PPP4CP60510 307 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 BLMHQ13867 455 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 ZNF483Q8TF39 744 aaPredicted RBP13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 ZNF570Q96NI8 536 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 CCDC113Q9H0I3 377 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 LRRC4CQ9HCJ2 640 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 E7ENQ6 273 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 RIPK2O43353 540 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 ATP5HO75947 161 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 GJB6O95452 261 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 CYP11B2P19099 503 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 TNNI2P48788 182 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 AUHQ13825 339 aaKnown RBP13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 SPATA21Q7Z572 469 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 RHOT2Q8IXI1 618 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 GLG1Q92896 1179 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 GRAMD1AQ96CP6 724 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 CPVLQ9H3G5 476 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 PPP1R9AQ9ULJ8 1098 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 LAMB2P55268 1798 aa13.38□□□□□ -0.27
CHMP2B-201ENST00000263780 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 SOX5P35711 763 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 ASPRV1Q53RT3 343 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 CYFIP1Q7L576 1253 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 WDR66Q8TBY9 1149 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 SERPINB12Q96P63 405 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 FGFBP2Q9BYJ0 223 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 ZHX3Q9H4I2 956 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 GRHL1Q9NZI5 618 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 E9PMD0 336 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 HIP1RO75146 1068 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 PTGIRP43119 386 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 CRKLP46109 303 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 CCDC15Q0P6D6 951 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 HAS1Q92839 578 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 SIX2Q9NPC8 291 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 KLHL14Q9P2G3 628 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 MTUS1Q9ULD2 1270 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 NR2E1Q9Y466 385 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 ITGB4P16144 1822 aa13.37□□□□□ -0.27
CHMP2B-201ENST00000263780 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 TCP11X1B4DZS4 312 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 ANKRD20A2Q5SQ80 823 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 ANKRD20A1Q5TYW2 823 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 ANKRD20A3Q5VUR7 823 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 AP1ARQ63HQ0 302 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 C16orf86Q6ZW13 317 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 ASRGL1Q7L266 308 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 MORC4Q8TE76 937 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 FBF1Q8TES7 1133 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 TXLNGQ9NUQ3 528 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 TYW1Q9NV66 732 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 MAST2Q6P0Q8 1798 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms