RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 RAD54LQ92698 747 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 OSMRQ99650 979 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 PTPRSQ13332 1948 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 NPHP3-ACAD11A0A0J9YXS1 232 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 A0A1B0GVL5 298 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 GHRP10912 638 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 STAT6P42226 847 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 SLC12A3P55017 1021 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 NLRP11P59045 1033 aaKnown RBP20.38■□□□□ 0.85
SDF4-201ENST00000263741 CACNB1Q02641 598 aaPredicted RBP20.38■□□□□ 0.85
SDF4-201ENST00000263741 FPGSQ05932 587 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 TMEM40Q8WWA1 233 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 DHX58Q96C10 678 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 NLRP4Q96MN2 994 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 POLR3FQ9H1D9 316 aaPredicted RBP20.38■□□□□ 0.85
SDF4-201ENST00000263741 TRPV2Q9Y5S1 764 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 LAMA3Q16787 3333 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 PTMSP20962 102 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 RINT1Q6NUQ1 792 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 RPAINQ86UA6 219 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 TMEM199Q8N511 208 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 PRPF31Q8WWY3 499 aaKnown RBP20.37■□□□□ 0.85
SDF4-201ENST00000263741 LARP4BQ92615 738 aaKnown RBP20.37■□□□□ 0.85
SDF4-201ENST00000263741 SCLT1Q96NL6 688 aa20.37■□□□□ 0.85
SDF4-201ENST00000263741 GPR32O75388 356 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 PFKFB1P16118 471 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 GPC3P51654 580 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 TCTN1Q2MV58 587 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 ADALQ6DHV7 355 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 CELF4Q9BZC1 486 aaKnown RBP20.36■□□□□ 0.85
SDF4-201ENST00000263741 GOLPH3LQ9H4A5 285 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 PPME1Q9Y570 386 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 M0QZ92 97 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 SLC26A4O43511 780 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 CAND2O75155 1236 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 CSDE1O75534 798 aaKnown RBP20.36■□□□□ 0.85
SDF4-201ENST00000263741 CYP11B2P19099 503 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 DNM2P50570 870 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 FAM26DQ5JW98 314 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 IER5Q5VY09 327 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 GPBP1Q86WP2 473 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 SYT2Q8N9I0 419 aaPredicted RBP20.36■□□□□ 0.85
SDF4-201ENST00000263741 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 PSPC1Q8WXF1 523 aaKnown RBP20.36■□□□□ 0.85
SDF4-201ENST00000263741 STAMQ92783 540 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 JPH2Q9BR39 696 aaPredicted RBP20.36■□□□□ 0.85
SDF4-201ENST00000263741 COL4A3BPQ9Y5P4 624 aa20.36■□□□□ 0.85
SDF4-201ENST00000263741 POLR2DO15514 142 aaKnown RBP20.35■□□□□ 0.85
SDF4-201ENST00000263741 LPIN1Q14693 890 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 E2F4Q16254 413 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 CCDC73Q6ZRK6 1079 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 NLRP7Q8WX94 980 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 BSNDQ8WZ55 320 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 ADAMTS10Q9H324 1103 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 FAM13BQ9NYF5 915 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 TRIOBPQ9H2D6 2365 aa20.35■□□□□ 0.85
SDF4-201ENST00000263741 A0A087WZ62 844 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.34■□□□□ 0.85
SDF4-201ENST00000263741 SRGAP2CP0DJJ0 459 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 LAMTOR4Q0VGL1 99 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 ARSHQ5FYA8 562 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 C1orf186Q6ZWK4 172 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 C16orf59Q7L2K0 433 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 NME8Q8N427 588 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 FDXACB1Q9BRP7 624 aaPredicted RBP20.34■□□□□ 0.85
SDF4-201ENST00000263741 AGO3Q9H9G7 860 aaKnown RBP20.34■□□□□ 0.85
SDF4-201ENST00000263741 STK17AQ9UEE5 414 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 GOLGA6L3A6NEY3 463 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 FGFR4P22455 802 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 GLRA2P23416 452 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 CMA1P23946 247 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 NDUFA8P51970 172 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 FBXO47Q5MNV8 452 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 CHRDL2Q6WN34 429 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 DAW1Q8N136 415 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 MCPH1Q8NEM0 835 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 TCP11Q8WWU5 503 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 GBP4Q96PP9 640 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 GDF15Q99988 308 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 KCNH3Q9ULD8 1083 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 GBF1Q92538 1859 aa20.34■□□□□ 0.85
SDF4-201ENST00000263741 HIP1RO75146 1068 aa20.33■□□□□ 0.85
SDF4-201ENST00000263741 GADD45BO75293 160 aaPredicted RBP20.33■□□□□ 0.85
SDF4-201ENST00000263741 ARL2P36404 184 aa20.33■□□□□ 0.85
SDF4-201ENST00000263741 PPIGQ13427 754 aaKnown RBP eCLIP20.33■□□□□ 0.85
SDF4-201ENST00000263741 CAPSQ13938 189 aa20.33■□□□□ 0.85
SDF4-201ENST00000263741 IL23AQ9NPF7 189 aa20.33■□□□□ 0.85
SDF4-201ENST00000263741 SFI1A8K8P3 1242 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 GAS2O43903 313 aaKnown RBP20.33■□□□□ 0.84
SDF4-201ENST00000263741 CD52P31358 61 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 MAPK7Q13164 816 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 C9orf50Q5SZB4 431 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 EXOC8Q8IYI6 725 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 RNF149Q8NC42 400 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 MRPS27Q92552 414 aaKnown RBP20.33■□□□□ 0.84
SDF4-201ENST00000263741 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.33■□□□□ 0.841e-10■■□□□ 11.9
SDF4-201ENST00000263741 REEP2Q9BRK0 252 aa20.33■□□□□ 0.84
SDF4-201ENST00000263741 KIFC3Q9BVG8 833 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms