RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 LLGL1Q15334 1064 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 TBC1D10BQ4KMP7 808 aaPredicted RBP18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ICA1LQ8NDH6 482 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 KIF17Q9P2E2 1029 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 KRT33BQ14525 404 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 MMS22LQ6ZRQ5 1243 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ELAC2Q9BQ52 826 aaKnown RBP18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ANTXR1Q9H6X2 564 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 SRGAP2CP0DJJ0 459 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 SERPINB10P48595 397 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 MAP3K10Q02779 954 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 TBXAS1P24557 533 aaPredicted RBP18.64■□□□□ 0.58
NOTCH3-201ENST00000263388 GPC5P78333 572 aa18.64■□□□□ 0.58
NOTCH3-201ENST00000263388 DYNC1I2Q13409 638 aaKnown RBP18.64■□□□□ 0.58
NOTCH3-201ENST00000263388 SCG3Q8WXD2 468 aaKnown RBP18.64■□□□□ 0.58
NOTCH3-201ENST00000263388 GINM1Q9NU53 330 aa18.64■□□□□ 0.58
NOTCH3-201ENST00000263388 ZNF189O75820 626 aaPredicted RBP18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 EP400NLQ6ZTU2 488 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 VIRMAQ69YN4 1812 aaKnown RBP18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 TBC1D9BQ66K14 1250 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 CEP70Q8NHQ1 597 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 NLRP4Q96MN2 994 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 AP3B2Q13367 1082 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 CDO1Q16878 200 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 RWDD4Q6NW29 188 aaKnown RBP18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 MICAL3Q7RTP6 2002 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 CHUKO15111 745 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 CYP27A1Q02318 531 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 TBCCQ15814 346 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 GFM2Q969S9 779 aaKnown RBP18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 TTC17Q96AE7 1141 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 COA7Q96BR5 231 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 ZWILCHQ9H900 591 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 USP6P35125 1406 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 E2F6O75461 281 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 GGPS1O95749 300 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 GFAPP14136 432 aa18.64■□□□□ 0.57
NOTCH3-201ENST00000263388 C1orf146Q5VVC0 180 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 TOGARAM2Q6ZUX3 1019 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 LCORLQ8N3X6 602 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 OSBPL9Q96SU4 736 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 ZNF212Q9UDV6 495 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 SNX2O60749 519 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 MTBPQ96DY7 904 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 PUS7LQ9H0K6 701 aaKnown RBP18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 SMYD3Q9H7B4 428 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 GMNCA6NCL1 334 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 UBXN2AP68543 259 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 TERF2Q15554 542 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 IRAK4Q9NWZ3 460 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 HPCAL4Q9UM19 191 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 CFAP73A6NFT4 308 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 MTERF2Q49AM1 385 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 MRFAP1Q9Y605 127 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 SLC16A2P36021 539 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 TTC8Q8TAM2 541 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 NCLNQ969V3 563 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 TMEM259Q4ZIN3 620 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 ASNSD1Q9NWL6 643 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 ADAM22Q9P0K1 906 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 OR6B2Q6IFH4 312 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 ZBTB33Q86T24 672 aa18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 KLHL8Q9P2G9 620 aaPredicted RBP18.63■□□□□ 0.57
NOTCH3-201ENST00000263388 GGCXP38435 758 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 CHAMP1Q96JM3 812 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 KRT7P08729 469 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 PPP2R2AP63151 447 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 MECOMQ03112 1051 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 NAALADL2Q58DX5 795 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 DCAF4Q8WV16 495 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 PUS3Q9BZE2 481 aaKnown RBP18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 WNT8AQ9H1J5 351 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 RNF17Q9BXT8 1623 aaKnown RBP18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 DYNLL1P63167 89 aaKnown RBP18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 CAPRIN1Q14444 709 aaKnown RBP18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 SNX19Q92543 992 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 TRPV6Q9H1D0 765 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 ARHGEF40Q8TER5 1519 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 ANO9A1A5B4 782 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 FOXP2O15409 715 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 MAGOHP61326 146 aaKnown RBP18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 TAF1DQ9H5J8 278 aaPredicted RBP18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 BCS1LQ9Y276 419 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 A0A087WWV3 80 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 Q3C1V9 767 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
NOTCH3-201ENST00000263388 PPP1R12AO14974 1030 aaPredicted RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 HSPA2P54652 639 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 ZNF699Q32M78 642 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 PNMA3Q9UL41 463 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 CLDN3O15551 220 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 CHGBP05060 677 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 ELMSAN1Q6PJG2 1045 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms