RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PTPRAP18433 802 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 LRMPQ12912 555 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 PDXDC1Q6P996 788 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 ACER1Q8TDN7 264 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 TACC3Q9Y6A5 838 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 IGSF9BQ9UPX0 1349 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 ERICH4A6NGS2 130 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 PLS3P13797 630 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 ZNF131P52739 623 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 MXD4Q14582 209 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 TTLL4Q14679 1199 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 TBC1D10BQ4KMP7 808 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 RRAGAQ7L523 313 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 ADPGKQ9BRR6 497 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 JPH1Q9HDC5 661 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 ZNF233A6NK53 670 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 VCAM1P19320 739 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 PAX3P23760 479 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 TBXAS1P24557 533 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 NPEPPSP55786 919 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 RPS6P62753 249 aaKnown RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 COL9A3Q14050 684 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 ANGEL2Q5VTE6 544 aaKnown RBP8.92□□□□□ -0.98
PTPN3-201ENST00000262539 KRT39Q6A163 491 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 MAEAQ7L5Y9 396 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 HAUS6Q7Z4H7 955 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 CD302Q8IX05 232 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 UBL4BQ8N7F7 174 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 FAM129AQ9BZQ8 928 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 TMEM39BQ9GZU3 492 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 KCNH7Q9NS40 1196 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 HOMER3Q9NSC5 361 aa8.92□□□□□ -0.98
PTPN3-201ENST00000262539 SPDYE5A6NIY4 337 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 CCDC144BQ3MJ40 725 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 DCAF17Q5H9S7 520 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 TTC30AQ86WT1 665 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ZNF677Q86XU0 584 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 CCDC26Q8TAB7 109 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PBKQ96KB5 322 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PARK7Q99497 189 aaKnown RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PLIN2Q99541 437 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ICAM3P32942 547 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PBX1P40424 430 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PRKCIP41743 596 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 CYP4A11Q02928 519 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 FMR1Q06787 632 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 STILQ15468 1287 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PSPC1Q8WXF1 523 aaKnown RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 RNF181Q9P0P0 153 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ITGB4P16144 1822 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 GMNNO75496 209 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 EIF2AK2P19525 551 aaKnown RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ZBTB16Q05516 673 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 GABPB1Q06547 395 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 RIOX2Q8IUF8 465 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 C2orf69Q8N8R5 385 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 TSPAN18Q96SJ8 248 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 HAUS2Q9NVX0 235 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 IRAK4Q9NWZ3 460 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 YDJCA8MPS7 323 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 VWA5AO00534 786 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 KRT19P08727 400 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PRR29P0C7W0 189 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 INHBEP58166 350 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ZPBP2Q6X784 338 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ZBTB33Q86T24 672 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 AMIGO3Q86WK7 504 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 GRAMD1CQ8IYS0 662 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 ABRAQ8N0Z2 381 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 KLRG1Q96E93 195 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 KMT5AQ9NQR1 393 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 SLC45A1Q9Y2W3 748 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 DDX60Q8IY21 1712 aaKnown RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 TTC26A0AVF1 554 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 GRID2IPA4D2P6 1211 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 LIG4P49917 911 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 RBL2Q08999 1139 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 CFAP157Q5JU67 520 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 IER5Q5VY09 327 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 GLG1Q92896 1179 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 FAM207AQ9NSI2 230 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 GUCA1BQ9UMX6 200 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 COL24A1Q17RW2 1714 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 HNRNPDLO14979 420 aaKnown RBP8.91□□□□□ -0.98
PTPN3-201ENST00000262539 THAP12O43422 761 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 OPA1O60313 960 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 PPP2R5DQ14738 602 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 RPS6KA1Q15418 735 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 NELFCDQ8IXH7 590 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 HAS1Q92839 578 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 CPVLQ9H3G5 476 aa8.91□□□□□ -0.98
PTPN3-201ENST00000262539 LAMB2P55268 1798 aa8.9□□□□□ -0.98
PTPN3-201ENST00000262539 ATP2C2O75185 946 aa8.9□□□□□ -0.98
PTPN3-201ENST00000262539 OATP04181 439 aa8.9□□□□□ -0.98
PTPN3-201ENST00000262539 METTL13Q8N6R0 699 aa8.9□□□□□ -0.98
PTPN3-201ENST00000262539 EIF1ADQ8N9N8 165 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms