RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GOLGA6L7A0A1B0GV03 622 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 GALCP54803 685 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 JAG1P78504 1218 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 RUBCNQ92622 972 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 LRRC45Q96CN5 670 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 ISCUQ9H1K1 167 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 ZNF70Q9UC06 446 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 DCDC2CA8MYV0 355 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 CALUO43852 315 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 TRIM49P0CI25 452 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 TRIM49CP0CI26 452 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 KRT13P13646 458 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 SLC12A3P55017 1021 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 MAGOHP61326 146 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 HHIPL2Q6UWX4 724 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 MDM1Q8TC05 714 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 MAGOHBQ96A72 148 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.73■□□□□ 0.111e-6■■■□□ 15.4
SFSWAP-201ENST00000261674 RUSC1Q9BVN2 902 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 HMGB1P1B2RPK0 211 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 FAM13AO94988 1023 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 STAT1P42224 750 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 MICALCLQ6ZW33 695 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 CCDC113Q9H0I3 377 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 AMFRQ9UKV5 643 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 RPL13P26373 211 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 TNFRSF8P28908 595 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 COG2Q14746 738 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 GLG1Q92896 1179 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 PBKQ96KB5 322 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
SFSWAP-201ENST00000261674 NRXN2Q9P2S2 1712 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 DDX3XO00571 662 aaKnown RBP eCLIP15.72■□□□□ 0.114e-7■□□□□ 8.8
SFSWAP-201ENST00000261674 EVI5O60447 810 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 HOXD13P35453 343 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 GABPAQ06546 454 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 RRP1BQ14684 758 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 UAP1Q16222 522 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CPLX4Q7Z7G2 160 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 IPO4Q8TEX9 1081 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 LMBR1Q8WVP7 490 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CABS1Q96KC9 395 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 TMOD4Q9NZQ9 345 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 PKD2L1Q9P0L9 805 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 UTP11Q9Y3A2 253 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 FAM86B1E9PN63 330 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 BUB1BO60566 1050 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 FAM86B2P0C5J1 330 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 ITGB3BPQ13352 177 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 EDRF1Q3B7T1 1238 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 EAPPQ56P03 285 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CCDC26Q8TAB7 109 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CCDC114Q96M63 670 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 TMBIM4Q9HC24 238 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 RABGAP1Q9Y3P9 1069 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CFBP00751 764 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 PLTPP55058 493 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 ZNF844Q08AG5 666 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 RASA3Q14644 834 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 CCDC121Q6ZUS5 278 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 FAM186BQ8IYM0 893 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 SLFN12Q8IYM2 578 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 ARFGAP2Q8N6H7 521 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 LRRC4CQ9HCJ2 640 aa15.72■□□□□ 0.11
SFSWAP-201ENST00000261674 A6NNZ2 444 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 PHF20L1A8MW92 1017 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 GH2P01242 217 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 HSPA9P38646 679 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 TUBB8Q3ZCM7 444 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 CERKLQ49MI3 558 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 AADACL2Q6P093 401 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 FRMD5Q7Z6J6 570 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 SLC35G2Q8TBE7 412 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 CTNNBL1Q8WYA6 563 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 SELENOSQ9BQE4 189 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 BZW2Q9Y6E2 419 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 SPATA31C1P0DKV0 1188 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 DRAP1Q14919 205 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 ANGEL2Q5VTE6 544 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 SCFD2Q8WU76 684 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 SLC35C1Q96A29 364 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■■■■ 34
SFSWAP-201ENST00000261674 SERPINA10Q9UK55 444 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 PPP1R9AQ9ULJ8 1098 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 SNX24Q9Y343 169 aa15.71■□□□□ 0.11
SFSWAP-201ENST00000261674 LAMB1P07942 1786 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 EML1O00423 815 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 MEIS2O14770 477 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 PPP1R12BO60237 982 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 TNFAIP3P21580 790 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms