RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FOXP2O15409 715 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ADAM23O75077 832 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FAM107AO95990 144 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FXR1P51114 621 aaKnown RBP eCLIP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CCR3P51677 355 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 NUBP1P53384 320 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 GUCY2DQ02846 1103 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 SMARCB1Q12824 385 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 KLHL38Q2WGJ6 581 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF704Q6ZNC4 412 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CSGALNACT2Q8N6G5 542 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PGBD1Q96JS3 809 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 NTN4Q9HB63 628 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 SH2B1Q9NRF2 756 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 SAMSN1Q9NSI8 373 aaKnown RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ZMYND8Q9ULU4 1186 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 RTCBQ9Y3I0 505 aaKnown RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 RWDD3Q9Y3V2 267 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PRKAB1Q9Y478 270 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 IQANK1A0A1B0GTG1 560 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ZSCAN5BA6NJL1 495 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 STMND1H3BQB6 276 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 SULT1B1O43704 296 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FGF18O76093 207 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FKBP9O95302 570 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PSMC2P35998 433 aaKnown RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 LRRC74AQ0VAA2 488 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 EPHA7Q15375 998 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 LRRC8BQ6P9F7 803 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC129Q6ZRS4 1044 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CYP4V2Q6ZWL3 525 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 EHBP1Q8NDI1 1231 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FNDC8Q8TC99 324 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FATE1Q969F0 183 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 SGK3Q96BR1 496 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 RRP7BPQ9NSQ0 103 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 MRPL11Q9Y3B7 192 aaKnown RBP8.32□□□□□ -1.08
GPNMB-201ENST00000258733 RTL1A6NKG5 1358 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 ACEP12821 1306 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 ANKRD50Q9ULJ7 1429 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 PCP4L1A6NKN8 68 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 HGSO14964 777 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 ARHGEF15O94989 841 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 HLA-DRAP01903 254 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 EIF2S1P05198 315 aaKnown RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 RAC2P15153 192 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 MUTP22033 750 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 MRPS15P82914 257 aaKnown RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 TMPRSS15P98073 1019 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 AP1B1Q10567 949 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 CYLC2Q14093 348 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 IFI16Q16666 785 aaKnown RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 NLRP14Q86W24 1093 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 IFNL3Q8IZI9 196 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 PANK1Q8TE04 598 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 AIPL1Q9NZN9 384 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 CFAP73A6NFT4 308 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 TLR2O60603 784 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 CALM1P0DP23 149 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 CALM2P0DP24 149 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 CALM3P0DP25 149 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 DNAJB1P25685 340 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 GNALP38405 381 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 CUL1Q13616 776 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 MAPRE2Q15555 327 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 FBXO43Q4G163 708 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 FCRLBQ6BAA4 426 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 PLBD1Q6P4A8 553 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 MFSD6Q6ZSS7 791 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 TEX19Q8NA77 164 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 ATP8B4Q8TF62 1192 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 COG1Q8WTW3 980 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 METTL2AQ96IZ6 378 aaKnown RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 NLRP4Q96MN2 994 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 TSNARE1Q96NA8 513 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 TUBA1CQ9BQE3 449 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 DDX18Q9NVP1 670 aaKnown RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 HBS1LQ9Y450 684 aaKnown RBP8.31□□□□□ -1.08
GPNMB-201ENST00000258733 PCDHB13Q9Y5F0 798 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 ARHGEF40Q8TER5 1519 aa8.31□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF335Q9H4Z2 1342 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 C17orf113A0A1B0GUU1 675 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 MACROD2A1Z1Q3 448 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 AGPSO00116 658 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 E2F3O00716 465 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 NCAM2O15394 837 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ATP2C2O75185 946 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 PPP1R37O75864 691 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 MRPS25P82663 173 aaKnown RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ADRM1Q16186 407 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 FAM180BQ6P0A1 224 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 METTL2BQ6P1Q9 378 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms