RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NOL4O94818 638 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ALAS1P13196 640 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 GAP43P17677 238 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 RPA1P27694 616 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ADCY8P40145 1251 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 MXI1P50539 228 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 AP3B2Q13367 1082 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SNCBQ16143 134 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 CYP4F22Q6NT55 531 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PPP1R18Q6NYC8 613 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 KDM7AQ6ZMT4 941 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ZNF662Q6ZS27 426 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 TAOK1Q7L7X3 1001 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 TBC1D1Q86TI0 1168 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 ZFPM1Q8IX07 1006 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SYN2Q92777 582 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 ELMO3Q96BJ8 720 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 INTS2Q9H0H0 1204 aaKnown RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 THAP2Q9H0W7 228 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 BCAS3Q9H6U6 928 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 NKIRAS1Q9NYS0 192 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ABCB11O95342 1321 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 MARF1Q9Y4F3 1742 aaKnown RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 TESPA1A2RU30 521 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 THAP12O43422 761 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 PPP1R11O60927 126 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 TRIM37O94972 964 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FAM107AO95990 144 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 IFNB1P01574 187 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 STX2P32856 288 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FMO5P49326 533 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 STAT2P52630 851 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 CLNS1AP54105 237 aaKnown RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 PMS2P54278 862 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 ITIH3Q06033 890 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 TRAF1Q13077 416 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SGO2Q562F6 1265 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 XKR9Q5GH70 373 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 RPUSD2Q8IZ73 545 aaKnown RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 CCDC63Q8NA47 563 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FAM20AQ96MK3 541 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 INPP4AQ96PE3 977 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 NACC1Q96RE7 527 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 MYCBPQ99417 103 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 CCDC77Q9BR77 488 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 TCHPQ9BT92 498 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 TEKT3Q9BXF9 490 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 HEMGNQ9BXL5 484 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 CD248Q9HCU0 757 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 HAUS2Q9NVX0 235 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 AIPL1Q9NZN9 384 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 N4BP2Q86UW6 1770 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 EMSYQ7Z589 1322 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 CNTNAP4Q9C0A0 1308 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FAM86B1E9PN63 330 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 DDX3XO00571 662 aaKnown RBP eCLIP5.12□□□□□ -1.59
USP44-201ENST00000258499 MSH4O15457 936 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FAM86B2P0C5J1 330 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SMARCA1P28370 1054 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 PEX3P56589 373 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 KAZNQ674X7 775 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 AADACL2Q6P093 401 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FMNL3Q8IVF7 1028 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SYT2Q8N9I0 419 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 FBXO25Q8TCJ0 367 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 C1orf54Q8WWF1 131 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 RUBCNQ92622 972 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FNBP1Q96RU3 617 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 ADAM33Q9BZ11 813 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SLITRK6Q9H5Y7 841 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 GDF3Q9NR23 364 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 HOMER3Q9NSC5 361 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 DBR1Q9UK59 544 aaKnown RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 PPP1R9AQ9ULJ8 1098 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 PCDHGC5Q9Y5F6 944 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 PCDHAC2Q9Y5I4 1007 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FOXN3O00409 490 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 CAND2O75155 1236 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 ECM2O94769 699 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 EYA4O95677 639 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 GAS8O95995 478 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 TNNI1P19237 187 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SSTR3P32745 418 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 SHMT1P34896 483 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 FLT3P36888 993 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 PDE6CP51160 858 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SMTNP53814 917 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SLC20A2Q08357 652 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 ZNF844Q08AG5 666 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 SLC29A2Q14542 456 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 UAP1Q16222 522 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 PPP2R5EQ16537 467 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 NBPF9Q3BBW0 867 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 HP1BP3Q5SSJ5 553 aaPredicted RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 NUGGCQ68CJ6 796 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 RINT1Q6NUQ1 792 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 CCDC137Q6PK04 289 aaKnown RBP5.12□□□□□ -1.59
USP44-201ENST00000258499 TMEM179Q6ZVK1 233 aa5.12□□□□□ -1.59
USP44-201ENST00000258499 AMIGO3Q86WK7 504 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms