RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 HSPA6P17066 643 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 PON1P27169 355 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 AUHQ13825 339 aaKnown RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 CCDC38Q502W7 563 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 NUDT12Q9BQG2 462 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 TMEM47Q9BQJ4 181 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 YIPF3Q9GZM5 350 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 SEMA4AQ9H3S1 761 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 FGFR1OP2Q9NVK5 253 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 ARMCX3Q9UH62 379 aaPredicted RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 PCDHA2Q9Y5H9 948 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 NCANO14594 1321 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 WTIPA6NIX2 430 aaPredicted RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 DDX3XO00571 662 aaKnown RBP eCLIP12.43□□□□□ -0.425e-12■□□□□ 8.3
TROAP-201ENST00000257909 HIP1RO75146 1068 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 RARGP13631 454 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 FERP16591 822 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 ATP5DP30049 168 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 CDC25CP30307 473 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 GALCP54803 685 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 DCAF12L1Q5VU92 463 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 SPATA21Q7Z572 469 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 KIF2BQ8N4N8 673 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 EPS8L3Q8TE67 593 aaKnown RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 PARD3BQ8TEW8 1205 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 U2AF1L4Q8WU68 220 aaKnown RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 SCFD1Q8WVM8 642 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 GLG1Q92896 1179 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 OSBPL1AQ9BXW6 950 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 GRHL1Q9NZI5 618 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 GGT7Q9UJ14 662 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 MTMR7Q9Y216 660 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 KDM3AQ9Y4C1 1321 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 A8MUI8 341 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 hCG_1984214I3L0E3 225 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 RIPK2O43353 540 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 SLC37A4O43826 429 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 PHF2O75151 1096 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 GOLGA8HP0CJ92 632 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 NR2F2P24468 414 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 CHRNA3P32297 505 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 ABL2P42684 1182 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 JAM2P57087 298 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 PPATQ06203 517 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 PLS1Q14651 629 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 NUGGCQ68CJ6 796 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 EXOC3L1Q86VI1 746 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 ZNF713Q8N859 430 aaPredicted RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 ZBTB10Q96DT7 871 aa12.43□□□□□ -0.42
TROAP-201ENST00000257909 FAM84BQ96KN1 310 aaPredicted RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
TROAP-201ENST00000257909 ROBO3Q96MS0 1386 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 TMEM253P0C7T8 217 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
TROAP-201ENST00000257909 ATP4AP20648 1035 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 LMNB1P20700 586 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 PDE6BP35913 854 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 CCDC15Q0P6D6 951 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 CMPK2Q5EBM0 449 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
TROAP-201ENST00000257909 SLC30A9Q6PML9 568 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 ERVK-5Q9HDB9 667 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 PRKAG3Q9UGI9 489 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 PPP1R9AQ9ULJ8 1098 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 LRRC42Q9Y546 428 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 TDP2O95551 362 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 KRT13P13646 458 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 SLCO1A2P46721 670 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 MRPS35P82673 323 aaKnown RBP12.42□□□□□ -0.42
TROAP-201ENST00000257909 HYIQ5T013 277 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 RNF43Q68DV7 783 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 LMNTD2Q8IXW0 634 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 FBF1Q8TES7 1133 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
TROAP-201ENST00000257909 OSGEPQ9NPF4 335 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 TMEM260Q9NX78 707 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 ANKIB1Q9P2G1 1089 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms