RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 FAM149B1Q96BN6 582 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 KIF12Q96FN5 646 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 YME1L1Q96TA2 773 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 LSM7Q9UK45 103 aaKnown RBP9.96□□□□□ -0.82
PDE6A-201ENST00000255266 HMGCRP04035 888 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 EFCAB12Q6NXP0 572 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 NECAB2Q7Z6G3 386 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 CCDC89Q8N998 374 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 GANCQ8TET4 914 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 C17orf75Q9HAS0 396 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 PXMP2Q9NR77 195 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 A0A1W2PRG0 241 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 EFCAB14O75071 495 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 UPP2O95045 317 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 ARL4AP40617 200 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 P2RX7Q99572 595 aaKnown RBP9.96□□□□□ -0.82
PDE6A-201ENST00000255266 CYBBP04839 570 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 STILQ15468 1287 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 PPP2R5EQ16537 467 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 LEKR1Q6ZMV7 388 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 CEP63Q96MT8 703 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 FAM207AQ9NSI2 230 aaPredicted RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 KANSL3Q9P2N6 904 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 AMFRQ9UKV5 643 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 HSF2BPO75031 334 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 PNPLA4P41247 253 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 EXOSC10Q01780 885 aaKnown RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 PLD1Q13393 1074 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 ENOSF1Q7L5Y1 443 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 SCN4BQ8IWT1 228 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 RYBPQ8N488 228 aaPredicted RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 TBC1D31Q96DN5 1066 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 MRPL9Q9BYD2 267 aaKnown RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 RIC1Q4ADV7 1423 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 EVI5O60447 810 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 SHMT1P34896 483 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 ACVR2BQ13705 512 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 TAF2Q6P1X5 1199 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 RUNDC3BQ96NL0 473 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 TYW1Q9NV66 732 aaKnown RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 MAD2L2Q9UI95 211 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 CLIC2O15247 247 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 NDUFA8P51970 172 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 METTL7BQ6UX53 244 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 TOGARAM2Q6ZUX3 1019 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 PDCL2Q8N4E4 241 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
PDE6A-201ENST00000255266 STKLD1Q8NE28 680 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 RSAD2Q8WXG1 361 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 TMEM169Q96HH4 297 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 RCOR1Q9UKL0 485 aa9.95□□□□□ -0.82
PDE6A-201ENST00000255266 CDC27P30260 824 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 ZNF280AP59817 542 aaPredicted RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PDXDC1Q6P996 788 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 NIPA1Q7RTP0 329 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PHF20Q9BVI0 1012 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 AGO2Q9UKV8 859 aaKnown RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 POTEMA6NI47 508 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 SPDYE5A6NIY4 337 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 HIP1RO75146 1068 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 TUBBP07437 444 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 POLR2FP61218 127 aaKnown RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 RBP5P82980 135 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 ELAVL2Q12926 359 aaKnown RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 RESTQ13127 1097 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 BZW1Q7L1Q6 419 aaKnown RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 TLK2Q86UE8 772 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 SFR1Q86XK3 245 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 ENTPD7Q9NQZ7 604 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 RGPD8O14715 1765 aaPredicted RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 LOC102724159A0A0B4J2E5 919 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 COG7P83436 770 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PLCB4Q15147 1175 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PWP2Q15269 919 aaKnown RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PKN2Q16513 984 aaKnown RBP9.94□□□□□ -0.82
PDE6A-201ENST00000255266 DUOXA2Q1HG44 320 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 OR6B2Q6IFH4 312 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 LRRC31Q6UY01 552 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 C4orf50Q6ZRC1 276 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 AFAP1L2Q8N4X5 818 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PAGE5Q96GU1 130 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 ZMYND12Q9H0C1 365 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 ATP5DP30049 168 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 C10orf76Q5T2E6 689 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 SPRYD7Q5W111 196 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 RESP18Q5W5W9 173 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 PEX26Q7Z412 305 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 NME8Q8N427 588 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 CCT6BQ92526 530 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 NLRC4Q9NPP4 1024 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 TUBE1Q9UJT0 475 aa9.94□□□□□ -0.82
PDE6A-201ENST00000255266 POTECB2RU33 542 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms