RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NPEPPSP55786 919 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 RASSF4Q9H2L5 321 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 SEPT11Q9NVA2 429 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 FRMD4BQ9Y2L6 1034 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 PPP1R12BO60237 982 aaPredicted RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 MAPK7Q13164 816 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 RBM12Q9NTZ6 932 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 NAB2Q15742 525 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 ALKBH5Q6P6C2 394 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 RIN2Q8WYP3 895 aaPredicted RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 UBXN6Q9BZV1 441 aa17.2■□□□□ 0.34
LRFN1-201ENST00000248668 LUC7LQ9NQ29 371 aaKnown RBP17.2■□□□□ 0.34
LRFN1-201ENST00000248668 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
LRFN1-201ENST00000248668 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
LRFN1-201ENST00000248668 PAFAH1B1P43034 410 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 SOX10P56693 466 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 DLG4P78352 724 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 TNIP1Q15025 636 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 WDR93Q6P2C0 686 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 AGO4Q9HCK5 861 aaKnown RBP17.19■□□□□ 0.34
LRFN1-201ENST00000248668 EIF3DO15371 548 aaKnown RBP eCLIP17.19■□□□□ 0.34
LRFN1-201ENST00000248668 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
LRFN1-201ENST00000248668 FMO5P49326 533 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 TUBB4BP68371 445 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 PLCB1Q9NQ66 1216 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 CNOT7Q9UIV1 285 aaKnown RBP17.19■□□□□ 0.34
LRFN1-201ENST00000248668 PCNTO95613 3336 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 GOLGA8IPA6NC78 632 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 GOLGA8JA6NMD2 632 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 PLA2G6O60733 806 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 B3GNT9Q6UX72 402 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 BORCS6Q96GS4 357 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 RIT2Q99578 217 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 CBWD1Q9BRT8 395 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 FAN1Q9Y2M0 1017 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 TELO2Q9Y4R8 837 aa17.19■□□□□ 0.34
LRFN1-201ENST00000248668 GRID2IPA4D2P6 1211 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 MYO1CO00159 1063 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 P4HBP07237 508 aaKnown RBP17.18■□□□□ 0.34
LRFN1-201ENST00000248668 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
LRFN1-201ENST00000248668 NAGPAQ9UK23 515 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 ESYT3A0FGR9 886 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 BAATQ14032 418 aaPredicted RBP17.18■□□□□ 0.34
LRFN1-201ENST00000248668 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 KIAA1683Q9H0B3 1180 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 DNAJC12Q9UKB3 198 aa17.18■□□□□ 0.34
LRFN1-201ENST00000248668 ZSCAN5CA6NGD5 496 aaPredicted RBP17.17■□□□□ 0.34
LRFN1-201ENST00000248668 BACH1O14867 736 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 SLC16A4O15374 487 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 EVI5O60447 810 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 ABCB4P21439 1286 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 RARRES1P49788 294 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 ZNF131P52739 623 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 HMGCS2P54868 508 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 PEX3P56589 373 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 TNFAIP1Q13829 316 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 DRAP1Q14919 205 aaPredicted RBP17.17■□□□□ 0.34
LRFN1-201ENST00000248668 PGM5Q15124 567 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 RNF207Q6ZRF8 634 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 GLYCTKQ8IVS8 523 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 RPGRIP1Q96KN7 1286 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 WRNIP1Q96S55 665 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 PEX10O60683 326 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 FAM102BQ5T8I3 360 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 RNF10Q8N5U6 811 aaKnown RBP17.17■□□□□ 0.34
LRFN1-201ENST00000248668 ODF2LQ9ULJ1 636 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 PSME4Q14997 1843 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 EIF3JO75822 258 aaKnown RBP17.17■□□□□ 0.34
LRFN1-201ENST00000248668 YWHABP31946 246 aaKnown RBP17.17■□□□□ 0.34
LRFN1-201ENST00000248668 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
LRFN1-201ENST00000248668 CCDC70Q6NSX1 233 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 STXBP4Q6ZWJ1 553 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 TXLNBQ8N3L3 684 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 LPAR1Q92633 364 aa17.17■□□□□ 0.34
LRFN1-201ENST00000248668 KCNK3O14649 394 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 MYL7Q01449 175 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 GPS2Q13227 327 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 SELENOOQ9BVL4 669 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 RNF146Q9NTX7 359 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 MYH11P35749 1972 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 CCDC169A6NNP5 214 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 DDX3XO00571 662 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRFN1-201ENST00000248668 CCNE2O96020 404 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 GUCY2CP25092 1073 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 GCLMP48507 274 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 ZSCAN26Q16670 478 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms