RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 MRPL11Q9Y3B7 192 aaKnown RBP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 BHMG1C9JSJ3 638 aaPredicted RBP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 CORO7P57737 925 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 PEX26Q7Z412 305 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 PACS2Q86VP3 889 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 FAM178BQ8IXR5 827 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 SYCE1Q8N0S2 351 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 CHURC1Q8WUH1 139 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 CNKSR1Q969H4 720 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 ISCUQ9H1K1 167 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 UNC45AQ9H3U1 944 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 TAF1DQ9H5J8 278 aaPredicted RBP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 AGPAT3Q9NRZ7 376 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 TMOD2Q9NZR1 351 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 WRAP73Q9P2S5 460 aaPredicted RBP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 MYH11P35749 1972 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 YDJCA8MPS7 323 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 UBXN2AP68543 259 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 B3GNT9Q6UX72 402 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 KSR1Q8IVT5 923 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 RASGEF1CQ8N431 466 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 ZFP91Q96JP5 570 aaPredicted RBP23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 ZBTB21Q9ULJ3 1066 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 NCANO14594 1321 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 GRIN2DO15399 1336 aa23.55■■□□□ 1.36
SH2D3A-201ENST00000245908 TCP10L2B9ZVM9 353 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 GUCY2FP51841 1108 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 SETQ01105 290 aaPredicted RBP23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 PPP2R5AQ15172 486 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 ZNF577Q9BSK1 485 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 DNAJC12Q9UKB3 198 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 FRMD4BQ9Y2L6 1034 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 NOC2LQ9Y3T9 749 aaKnown RBP23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 DAAM1Q9Y4D1 1078 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 ZNF233A6NK53 670 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 PLA2G6O60733 806 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 LMNB1P20700 586 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 HSPA9P38646 679 aaKnown RBP23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 GALCP54803 685 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 ERVK-9P63128 1117 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 TRADDQ15628 312 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 NT5DC3Q86UY8 548 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 SYT11Q9BT88 431 aa23.54■■□□□ 1.36
SH2D3A-201ENST00000245908 CCDC188H7C350 402 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 ARP10275 920 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 CHRNA5P30532 468 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 CUL1Q13616 776 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 DRAP1Q14919 205 aaPredicted RBP23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 CBWD6Q4V339 395 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 CBWD3Q5JTY5 395 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 CBWD5Q5RIA9 395 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 STRA6Q9BX79 667 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 TEKT3Q9BXF9 490 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 GPR88Q9GZN0 384 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 SPDYE2BA6NHP3 402 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 A6NNZ2 444 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 TMCO5BA8MYB1 307 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 EIF3HO15372 352 aaKnown RBP eCLIP23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 KRT14P02533 472 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 SPDYE6P0CI01 402 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 CYP2J2P51589 502 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 TUBB8Q3ZCM7 444 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 ODR4Q5SWX8 454 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 SLC9A9Q8IVB4 645 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 FMNL3Q8IVF7 1028 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 FAM151AQ8WW52 585 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 HES6Q96HZ4 224 aa23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 INTS2Q9H0H0 1204 aaKnown RBP23.53■■□□□ 1.36
SH2D3A-201ENST00000245908 GNGT1P63211 74 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 PTPROQ16827 1216 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 DAAM2Q86T65 1068 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 C1orf131Q8NDD1 294 aaKnown RBP23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 SUPT20HQ8NEM7 779 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 VCPKMTQ9H867 229 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 PPP1R37O75864 691 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 APBA3O96018 575 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 CPP00450 1065 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 TMEM253P0C7T8 217 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 ECHS1P30084 290 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 FAM160B2Q86V87 743 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 LXNQ9BS40 222 aa23.52■■□□□ 1.36
SH2D3A-201ENST00000245908 MAPK7Q13164 816 aa23.51■■□□□ 1.35
SH2D3A-201ENST00000245908 GLYCTKQ8IVS8 523 aa23.51■■□□□ 1.35
SH2D3A-201ENST00000245908 NEK9Q8TD19 979 aa23.51■■□□□ 1.35
SH2D3A-201ENST00000245908 RFFLQ8WZ73 363 aa23.51■■□□□ 1.35
SH2D3A-201ENST00000245908 AP1M1Q9BXS5 423 aa23.51■■□□□ 1.35
SH2D3A-201ENST00000245908 APEX2Q9UBZ4 518 aa23.51■■□□□ 1.35
SH2D3A-201ENST00000245908 SART1O43290 800 aaKnown RBP23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 PPIP5K2O43314 1243 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 TRIM49P0CI25 452 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 TRIM49CP0CI26 452 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 MYL7Q01449 175 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 MYBPC2Q14324 1141 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 DNAJC21Q5F1R6 531 aaKnown RBP23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 RIT2Q99578 217 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 DEFB129Q9H1M3 183 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 ZNF70Q9UC06 446 aaPredicted RBP23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 CLRN2A0PK11 232 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 ARHGEF35A5YM69 484 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms