RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 KARSQ15046 597 aaKnown RBP7.93□□□□□ -1.14
MED28-201ENST00000237380 DTX3LQ8TDB6 740 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 SCOCQ9UIL1 159 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 SYNJ2BP-COX16A0A087WUM0 186 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 NR2F2P24468 414 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 COX16Q9P0S2 106 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 ARHGAP26Q9UNA1 814 aa7.93□□□□□ -1.14
MED28-201ENST00000237380 CCDC189A1A4V9 331 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 NPEPPSP55786 919 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 MAPRE2Q15555 327 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ZNF699Q32M78 642 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 HSP90AA4PQ58FG1 418 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 PDIK1LQ8N165 341 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 OR6J1Q8NGC5 347 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 RIN2Q8WYP3 895 aaPredicted RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 ORAI2Q96SN7 254 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 CLRN2A0PK11 232 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 FAM9CQ8IZT9 166 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.92□□□□□ -1.14
MED28-201ENST00000237380 MRRFQ96E11 262 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 DBNDD2Q9BQY9 259 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 EMILIN2Q9BXX0 1053 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 CHL1O00533 1208 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 PRRG1O14668 218 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 HIST1H2AGP0C0S8 130 aaPredicted RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 HIST1H2ADP20671 130 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 RCAN1P53805 252 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ABCE1P61221 599 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 TGM3Q08188 693 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 LRMPQ12912 555 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 SCN4BQ8IWT1 228 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 PCSK9Q8NBP7 692 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 HIST1H2AHQ96KK5 128 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 HIST1H2AJQ99878 128 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 H2AFJQ9BTM1 129 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ZSCAN32Q9NX65 697 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 HDAC6Q9UBN7 1215 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 RPS6KA4O75676 772 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 OCRLQ01968 901 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 C16orf62Q7Z3J2 963 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 FAM227BQ96M60 508 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 MED15Q96RN5 788 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ZBTB40Q9NUA8 1239 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 EIF4E1BA6NMX2 242 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 KRT37O76014 449 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ATP1A1P05023 1023 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 CDK17Q00537 523 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 CCNG2Q16589 344 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 MAN2A1Q16706 1144 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ZNF568Q3ZCX4 644 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 GLB1LQ6UWU2 654 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ANGPTL8Q6UXH0 198 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 REM2Q8IYK8 340 aaPredicted RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 VPS37AQ8NEZ2 397 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 PHKBQ93100 1093 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 NSMCE4AQ9NXX6 385 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 KLHL8Q9P2G9 620 aaPredicted RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 GGPS1O95749 300 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 INPP5BP32019 993 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 CAPZA2P47755 286 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 SNRPFP62306 86 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 ZNF544Q6NX49 715 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ACAD11Q709F0 780 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 NFE2L3Q9Y4A8 694 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 H3BRJ5 948 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 PRPF4O43172 522 aaKnown RBP eCLIP7.92□□□□□ -1.14
MED28-201ENST00000237380 ORC4O43929 436 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 STAT3P40763 770 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 MXI1P50539 228 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 SGO2Q562F6 1265 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 XRRA1Q6P2D8 792 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 HS6ST3Q8IZP7 471 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 TMEM35BQ8NCS4 154 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 SMARCAD1Q9H4L7 1026 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 STK39Q9UEW8 545 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 L3MBTL1Q9Y468 752 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 CAND2O75155 1236 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 MMP10P09238 476 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ACADMP11310 421 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 RGS2P41220 211 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 MAP3K7CLP57077 242 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 EIF4A1P60842 406 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 SLC45A4Q5BKX6 768 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 LMBRD2Q68DH5 695 aaPredicted RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 SYNE4Q8N205 404 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 ZNF653Q96CK0 615 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 NAF1Q96HR8 494 aaKnown RBP7.92□□□□□ -1.14
MED28-201ENST00000237380 KIF17Q9P2E2 1029 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 PALLDQ8WX93 1383 aa7.92□□□□□ -1.14
MED28-201ENST00000237380 RAD17O75943 681 aa7.91□□□□□ -1.14
MED28-201ENST00000237380 CYP2E1P05181 493 aaPredicted RBP7.91□□□□□ -1.14
MED28-201ENST00000237380 GTF2A2P52657 109 aa7.91□□□□□ -1.14
MED28-201ENST00000237380 HPCAP84074 193 aa7.91□□□□□ -1.14
MED28-201ENST00000237380 TAF1CQ15572 869 aaPredicted RBP7.91□□□□□ -1.14
MED28-201ENST00000237380 DCP1BQ8IZD4 617 aaKnown RBP7.91□□□□□ -1.14
MED28-201ENST00000237380 TSPAN17Q96FV3 270 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms