RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CFAP73A6NFT4 308 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 ECEL1O95672 775 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 PABPC4Q13310 644 aaKnown RBP eCLIP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 PICALMQ13492 652 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 SPATA21Q7Z572 469 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 PBKQ96KB5 322 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 DDX23Q9BUQ8 820 aaKnown RBP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 DDX25Q9UHL0 483 aaKnown RBP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 TIAM2Q8IVF5 1701 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 FLOT1O75955 427 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 RASA1P20936 1047 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 ADCY7P51828 1080 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 RAD23BP54727 409 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 SLC29A2Q14542 456 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 ARHGAP44Q17R89 818 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 CCDC65Q8IXS2 484 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 AMFRQ9UKV5 643 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 hCG_2014768A0A024R1R8 64 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 KRT16P08779 473 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 HSPA2P54652 639 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 IFI16Q16666 785 aaKnown RBP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 SLC5A9Q2M3M2 681 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 DENND2CQ68D51 928 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 SCFD1Q8WVM8 642 aa15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 AJAP1Q9UKB5 411 aaPredicted RBP15.3■□□□□ 0.04
PCDHB3-201ENST00000231130 POTEFA5A3E0 1075 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 PLA2G4BP0C869 781 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 CASP4P49662 377 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 CYP4A11Q02928 519 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 POTEGQ6S5H5 508 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 POTEEQ6S8J3 1075 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 VPS36Q86VN1 386 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 DAGLBQ8NCG7 672 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 FBXO25Q8TCJ0 367 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 DNAJC19Q96DA6 116 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 KCNK9Q9NPC2 374 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 DAAM1Q9Y4D1 1078 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 TAF1P21675 1872 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 CDK8P49336 464 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 GALCP54803 685 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 RNF220Q5VTB9 566 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 EPS8L3Q8TE67 593 aaKnown RBP15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L15C9J2P7 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L13C9JLJ4 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L11C9JVI0 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L18D6R9N7 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L22D6RA61 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L17D6RBQ6 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L19D6RCP7 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L20D6RJB6 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 XRCC5P13010 732 aaKnown RBP15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 RFC5P40937 340 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 DR1Q01658 176 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L24Q0WX57 530 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 USP17L6PQ6QN14 398 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 TRMT1LQ7Z2T5 733 aaKnown RBP15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 CNBD1Q8NA66 436 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 SEMA4AQ9H3S1 761 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 ERVK-5Q9HDB9 667 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 LRRN2O75325 713 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 SETSIPP0DME0 302 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 ITPK1Q13572 414 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 GDAP1Q8TB36 358 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 MTMR9Q96QG7 549 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 RPS6KC1Q96S38 1066 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 NSRP1Q9H0G5 558 aaKnown RBP15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 GCNT4Q9P109 453 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 TMEM59LQ9UK28 342 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 MYH7BA7E2Y1 1941 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 RNF8O76064 485 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 SLURP2P0DP57 97 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 TUBP50607 506 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 KCNA1Q09470 495 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 TTBK2Q6IQ55 1244 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 FAM81AQ8TBF8 368 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 EDEM3Q9BZQ6 932 aa15.28■□□□□ 0.04
PCDHB3-201ENST00000231130 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 PLCG2P16885 1265 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 TPP2P29144 1249 aaPredicted RBP15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 MSH2P43246 934 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 SIK1P57059 783 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 ACTRT1Q8TDG2 376 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 GORASP1Q9BQQ3 440 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 GANQ9H2C0 597 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms