RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 BIRC3Q13489 604 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 GRM4Q14833 912 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 SUDS3Q9H7L9 328 aaPredicted RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 SNX24Q9Y343 169 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 A0A087X0T9 212 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 EVI5O60447 810 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 RHOBTB3O94955 611 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 FAM228BP0C875 321 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 SESN3P58005 492 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 TAF11Q15544 211 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 U2AF1L4Q8WU68 220 aaKnown RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 FMO2Q99518 471 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 TRAPPC3O43617 180 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 SMIM24O75264 130 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 PRAMEF18Q5VWM3 479 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 RINLQ6ZS11 566 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 YTHDF3Q7Z739 585 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 PRCCQ92733 491 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 KDM3AQ9Y4C1 1321 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 H0Y3Z8 333 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 FDX1P10109 184 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 FLT3P36888 993 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 PPP1R2P41236 205 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 NFIAQ12857 509 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 PLCB4Q15147 1175 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 ARL6IP4Q66PJ3 421 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 USP38Q8NB14 1042 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 GDAP1Q8TB36 358 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 SHISA4Q96DD7 197 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 TEKT3Q9BXF9 490 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 CNOT8Q9UFF9 292 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 FGGP02679 453 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 ITGA4P13612 1032 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 PRLRP16471 622 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 RASA1P20936 1047 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 RWDD2BP57060 319 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 ELF3P78545 371 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 HERC4Q5GLZ8 1057 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 TPH2Q8IWU9 490 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 TBCKQ8TEA7 893 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 SCAF8Q9UPN6 1271 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 ZNF211Q13398 564 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 LRRC34Q8IZ02 419 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 ZNF483Q8TF39 744 aaPredicted RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 ERGIC2Q96RQ1 377 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 ELP3Q9H9T3 547 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 A1CFQ9NQ94 594 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 DNAJC17Q9NVM6 304 aaKnown RBP12.43□□□□□ -0.42
CCND1-201ENST00000227507 NYAP2Q9P242 653 aa12.43□□□□□ -0.42
CCND1-201ENST00000227507 MYH10P35580 1976 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 SERPING1P05155 500 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 HMGCS2P54868 508 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 UBXN2AP68543 259 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 ADCY2Q08462 1091 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 CUL1Q13616 776 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 VSIG1Q86XK7 387 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 ATP6V0A4Q9HBG4 840 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
CCND1-201ENST00000227507 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
CCND1-201ENST00000227507 EPHX2P34913 555 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 TROAPQ12815 778 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 NAALADL2Q58DX5 795 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.427e-10■■■■■ 31.9
CCND1-201ENST00000227507 CDHR1Q96JP9 859 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 SEMA6BQ9H3T3 888 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 PTPN22Q9Y2R2 807 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 CCDC169A6NNP5 214 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 HIP1RO75146 1068 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 CNGA1P29973 690 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 SNAP25P60880 206 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 MXRA7P84157 204 aa12.42□□□□□ -0.42
CCND1-201ENST00000227507 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
CCND1-201ENST00000227507 PFKFB3Q16875 520 aaPredicted RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 MYOCDQ8IZQ8 938 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 LPAR1Q92633 364 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms