RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
FRG1-201ENST00000226798 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 FAM86C1Q9NVL1 165 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
FRG1-201ENST00000226798 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 GFRA3O60609 400 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
FRG1-201ENST00000226798 VTNP04004 478 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
FRG1-201ENST00000226798 PPM1AP35813 382 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 NECTIN1Q15223 517 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 KCNT2Q6UVM3 1135 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
FRG1-201ENST00000226798 PPP1R16BQ96T49 567 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 IRF2BPLQ9H1B7 796 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
FRG1-201ENST00000226798 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
FRG1-201ENST00000226798 MAFBQ9Y5Q3 323 aaPredicted RBP13.15□□□□□ -0.3
FRG1-201ENST00000226798 IPO5O00410 1097 aaKnown RBP13.14□□□□□ -0.31
FRG1-201ENST00000226798 HOXA2O43364 376 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
FRG1-201ENST00000226798 PBX3P40426 434 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 SWSAP1Q6NVH7 229 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 MIS18BP1Q6P0N0 1132 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 LINC01465Q8N7H1 131 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
FRG1-201ENST00000226798 RIPOR3Q96MK2 946 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 ZNF558Q96NG5 402 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 APOL5Q9BWW9 433 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 PUF60Q9UHX1 559 aaKnown RBP13.14□□□□□ -0.31
FRG1-201ENST00000226798 CDH22Q9UJ99 828 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 NR2E1Q9Y466 385 aa13.14□□□□□ -0.31
FRG1-201ENST00000226798 SMCO2A6NFE2 343 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 PROB1E7EW31 1015 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 CYP3A4P08684 503 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
FRG1-201ENST00000226798 ZNF76P36508 570 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 RTN1Q16799 776 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 ZNF746Q6NUN9 644 aaPredicted RBP13.13□□□□□ -0.31
FRG1-201ENST00000226798 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 METTL13Q8N6R0 699 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 KREMEN2Q8NCW0 462 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 CASP10Q92851 521 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
FRG1-201ENST00000226798 ESYT1Q9BSJ8 1104 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 SORCS3Q9UPU3 1222 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 HCFC2Q9Y5Z7 792 aa13.13□□□□□ -0.31
FRG1-201ENST00000226798 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 C2CD4DB7Z1M9 353 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 BRD1O95696 1058 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 CLCN3P51790 818 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
FRG1-201ENST00000226798 ITIH3Q06033 890 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 MTMR3Q13615 1198 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 SMC1AQ14683 1233 aaKnown RBP13.12□□□□□ -0.31
FRG1-201ENST00000226798 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 TMC7Q7Z402 723 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 ZBTB33Q86T24 672 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 SMAP1Q8IYB5 467 aaPredicted RBP13.12□□□□□ -0.31
FRG1-201ENST00000226798 UBALD2Q8IYN6 164 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
FRG1-201ENST00000226798 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 ADAM7Q9H2U9 754 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 ADAMTS10Q9H324 1103 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 TBC1D22BQ9NU19 505 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
FRG1-201ENST00000226798 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
FRG1-201ENST00000226798 H0Y858 1186 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 MAGEB2O15479 319 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 ZBTB43O43298 467 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 EIF4BP23588 611 aaKnown RBP13.11□□□□□ -0.31
FRG1-201ENST00000226798 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
FRG1-201ENST00000226798 KRT17Q04695 432 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 JAKMIP3Q5VZ66 844 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 ZNF598Q86UK7 904 aaKnown RBP13.11□□□□□ -0.31
FRG1-201ENST00000226798 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 MAP7D2Q96T17 732 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
FRG1-201ENST00000226798 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
FRG1-201ENST00000226798 A0A0U1RQF3 1178 aa13.1□□□□□ -0.31
FRG1-201ENST00000226798 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
FRG1-201ENST00000226798 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms