RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 USP38Q8NB14 1042 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 SNX29Q8TEQ0 813 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 NLRP7Q8WX94 980 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 LINC01599Q8WXQ3 324 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 SLC7A3Q8WY07 619 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 TMX1Q9H3N1 280 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 SEMA6BQ9H3T3 888 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 ST3GAL5Q9UNP4 418 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 PCDHA11Q9Y5I1 949 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 CLIC4Q9Y696 253 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 A0A087WZ62 844 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 VWA3AA6NCI4 1184 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 TLL1O43897 1013 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 MGEA5O60502 916 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 ARHGEF15O94989 841 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 FGFR4P22455 802 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 HAUS3Q68CZ6 603 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 CCDC43Q96MW1 224 aaKnown RBP14.14□□□□□ -0.15
LSM5-201ENST00000223084 MTRQ99707 1265 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 JPH2Q9BR39 696 aaPredicted RBP14.14□□□□□ -0.15
LSM5-201ENST00000223084 FDXACB1Q9BRP7 624 aaPredicted RBP14.14□□□□□ -0.15
LSM5-201ENST00000223084 MMTAG2Q9BU76 263 aaKnown RBP14.14□□□□□ -0.15
LSM5-201ENST00000223084 RAB34Q9BZG1 259 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 XPNPEP1Q9NQW7 623 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 MTMR10Q9NXD2 777 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 PPME1Q9Y570 386 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 TTC3P53804 2025 aa14.14□□□□□ -0.15
LSM5-201ENST00000223084 LCHNA4D1U4 455 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 GPR182O15218 404 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 USO1O60763 962 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 GJB5O95377 273 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 CA3P07451 260 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 XRCC6P12956 609 aaKnown RBP eCLIP14.13□□□□□ -0.15
LSM5-201ENST00000223084 DARSP14868 501 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 IBSPP21815 317 aaPredicted RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 CEBPZQ03701 1054 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 GRIN1Q05586 938 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 PKP1Q13835 747 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 ZRSR1Q15695 479 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 ARL6IP4Q66PJ3 421 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 MAEAQ7L5Y9 396 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 GUCD1Q96NT3 240 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 NACC1Q96RE7 527 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 PLIN2Q99541 437 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 ZNF576Q9H609 170 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
LSM5-201ENST00000223084 KIAA1024Q9UPX6 916 aa14.13□□□□□ -0.15
LSM5-201ENST00000223084 SRGAP2CP0DJJ0 459 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 EIF4BP23588 611 aaKnown RBP14.12□□□□□ -0.15
LSM5-201ENST00000223084 LAMTOR4Q0VGL1 99 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 GRIN2CQ14957 1233 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 PTPAQ15257 358 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 KRT79Q5XKE5 535 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 EXOC8Q8IYI6 725 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 ASAP3Q8TDY4 903 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 PSPC1Q8WXF1 523 aaKnown RBP14.12□□□□□ -0.15
LSM5-201ENST00000223084 TOP1MTQ969P6 601 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
LSM5-201ENST00000223084 SLC28A3Q9HAS3 691 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 GPRC5CQ9NQ84 441 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 DBR1Q9UK59 544 aaKnown RBP14.12□□□□□ -0.15
LSM5-201ENST00000223084 COL4A3BPQ9Y5P4 624 aa14.12□□□□□ -0.15
LSM5-201ENST00000223084 TMEM265A0A087WTH1 108 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 ARHGEF35A5YM69 484 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 E9PMD0 336 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 DGAT1O75907 488 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 BMP15O95972 392 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
LSM5-201ENST00000223084 PPP2R2DQ66LE6 453 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 PADI6Q6TGC4 694 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 KCNK18Q7Z418 384 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 ZNF710Q8N1W2 664 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 TCP11Q8WWU5 503 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 PNMA5Q96PV4 448 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 USP28Q96RU2 1077 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 RAD9AQ99638 391 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 ADAM2Q99965 735 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 FTHL17Q9BXU8 183 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
LSM5-201ENST00000223084 ZSCAN16Q9H4T2 348 aaPredicted RBP14.11□□□□□ -0.15
LSM5-201ENST00000223084 CERS4Q9HA82 394 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 IFT122Q9HBG6 1241 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 POLD4Q9HCU8 107 aa14.11□□□□□ -0.15
LSM5-201ENST00000223084 DENND3A2RUS2 1198 aa14.1□□□□□ -0.15
LSM5-201ENST00000223084 GAS2O43903 313 aaKnown RBP14.1□□□□□ -0.15
LSM5-201ENST00000223084 ZSCAN22P10073 491 aaPredicted RBP14.1□□□□□ -0.15
LSM5-201ENST00000223084 MUTP22033 750 aa14.1□□□□□ -0.15
LSM5-201ENST00000223084 ARL2P36404 184 aa14.1□□□□□ -0.15
LSM5-201ENST00000223084 HTRA4P83105 476 aaPredicted RBP14.1□□□□□ -0.15
LSM5-201ENST00000223084 CDC42EP1Q00587 391 aa14.1□□□□□ -0.15
LSM5-201ENST00000223084 TAP1Q03518 808 aa14.1□□□□□ -0.15
LSM5-201ENST00000223084 GRB10Q13322 594 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms