RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 MKNK1Q9BUB5 465 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 GDF3Q9NR23 364 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 A0A087X0T9 212 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 BTNL10A8MVZ5 291 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 CLSTN1O94985 981 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 FAM228BP0C875 321 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 ITGB5P18084 799 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 ANXA13P27216 316 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 APBA1Q02410 837 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 TCERG1LQ5VWI1 586 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 DPY19L2P1Q6NXN4 242 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 IFT20Q8IY31 132 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.22■■□□□ 1.47
CCDC9-201ENST00000221922 RASSF4Q9H2L5 321 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 SFI1A8K8P3 1242 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 TGFB1I1O43294 461 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 FLOT1O75955 427 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 FDX1P10109 184 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 SLC9A1P19634 815 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 PSMC2P35998 433 aaKnown RBP24.21■■□□□ 1.47
CCDC9-201ENST00000221922 PPFIA1Q13136 1202 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 MTMR2Q13614 643 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 NBPF12Q5TAG4 269 aaPredicted RBP24.21■■□□□ 1.47
CCDC9-201ENST00000221922 TSEN2Q8NCE0 465 aaKnown RBP24.21■■□□□ 1.47
CCDC9-201ENST00000221922 SLC35C1Q96A29 364 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 ZMYM2Q9UBW7 1377 aa24.21■■□□□ 1.47
CCDC9-201ENST00000221922 TRIM66O15016 1216 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 CLIC2O15247 247 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 ALAS1P13196 640 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 GUCY2CP25092 1073 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 NMT1P30419 496 aaKnown RBP24.2■■□□□ 1.47
CCDC9-201ENST00000221922 ARID5AQ03989 594 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 PCNX4Q63HM2 1172 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 HS2ST1Q7LGA3 356 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 FAM178BQ8IXR5 827 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 RAVER2Q9HCJ3 691 aaKnown RBP24.2■■□□□ 1.47
CCDC9-201ENST00000221922 ZNF112Q9UJU3 913 aa24.2■■□□□ 1.47
CCDC9-201ENST00000221922 ACTN1P12814 892 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 CASP4P49662 377 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 KIAA0753Q2KHM9 967 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 CPXCR1Q8N123 301 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 INPP4AQ96PE3 977 aaPredicted RBP24.2■■□□□ 1.46
CCDC9-201ENST00000221922 LXNQ9BS40 222 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 RSPH14Q9UHP6 348 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 PCDHB13Q9Y5F0 798 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 UBIAD1Q9Y5Z9 338 aa24.2■■□□□ 1.46
CCDC9-201ENST00000221922 ARHGEF35A5YM69 484 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 KCNA1Q09470 495 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 DGKZQ13574 1117 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 ZNF720Q7Z2F6 126 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 FAM186BQ8IYM0 893 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 SCYL3Q8IZE3 742 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 IL31RAQ8NI17 732 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 SYTL5Q8TDW5 730 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-201ENST00000221922 ZFP91Q96JP5 570 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-201ENST00000221922 RPAP3Q9H6T3 665 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-201ENST00000221922 KCNH7Q9NS40 1196 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 ADAMTS1Q9UHI8 967 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 FTCDO95954 541 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 GLI1P08151 1106 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 IRF2BP2Q7Z5L9 587 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 C10orf67Q8IYJ2 551 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 BORCS6Q96GS4 357 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 POLD4Q9HCU8 107 aa24.19■■□□□ 1.46
CCDC9-201ENST00000221922 WRAP73Q9P2S5 460 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-201ENST00000221922 CES2O00748 559 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 ZBED4O75132 1171 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 PRKCIP41743 596 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 IRAK1P51617 712 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 APOBEC3FQ8IUX4 373 aaKnown RBP24.18■■□□□ 1.46
CCDC9-201ENST00000221922 FIZ1Q96SL8 496 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 BCAS3Q9H6U6 928 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 GCNT4Q9P109 453 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 ATP8B3O60423 1300 aa24.18■■□□□ 1.46
CCDC9-201ENST00000221922 ZBTB39O15060 712 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 HSF2BPO75031 334 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 TKFCQ3LXA3 575 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 PACSIN1Q9BY11 444 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 AS3MTQ9HBK9 375 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 ZNF541Q9H0D2 1346 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 BACE1P56817 501 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 PTK2Q05397 1052 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 ZC2HC1CQ53FD0 456 aaPredicted RBP24.17■■□□□ 1.46
CCDC9-201ENST00000221922 ODR4Q5SWX8 454 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 MIER3Q7Z3K6 550 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 VPS36Q86VN1 386 aa24.17■■□□□ 1.46
CCDC9-201ENST00000221922 AGO4Q9HCK5 861 aaKnown RBP24.17■■□□□ 1.46
CCDC9-201ENST00000221922 CTDP1Q9Y5B0 961 aaPredicted RBP24.17■■□□□ 1.46
CCDC9-201ENST00000221922 DHX15O43143 795 aaKnown RBP24.16■■□□□ 1.46
CCDC9-201ENST00000221922 SPP2Q13103 211 aa24.16■■□□□ 1.46
CCDC9-201ENST00000221922 PAK2Q13177 524 aa24.16■■□□□ 1.46
CCDC9-201ENST00000221922 MREGQ8N565 214 aa24.16■■□□□ 1.46
CCDC9-201ENST00000221922 SIX2Q9NPC8 291 aa24.16■■□□□ 1.46
CCDC9-201ENST00000221922 FRMD4BQ9Y2L6 1034 aa24.16■■□□□ 1.46
CCDC9-201ENST00000221922 HEXIM1O94992 359 aaKnown RBP24.15■■□□□ 1.46
CCDC9-201ENST00000221922 CARSP49589 748 aaKnown RBP24.15■■□□□ 1.46
CCDC9-201ENST00000221922 JAM2P57087 298 aa24.15■■□□□ 1.46
CCDC9-201ENST00000221922 MRPS9P82933 396 aaKnown RBP24.15■■□□□ 1.46
CCDC9-201ENST00000221922 ENOX2Q16206 610 aaKnown RBP24.15■■□□□ 1.46
CCDC9-201ENST00000221922 IFI16Q16666 785 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms