RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 GUCA1CO95843 209 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 ITGA6P23229 1130 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 RPS26P62854 115 aaKnown RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 KIF23Q02241 960 aaPredicted RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 RPL6Q02878 288 aaKnown RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 USP53Q70EK8 1073 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 RAB44Q7Z6P3 723 aaPredicted RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 VPS33BQ9H267 617 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 ZNF576Q9H609 170 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 ITIH6Q6UXX5 1313 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 CHURC1-FNTBB4DL54 471 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 ZBED4O75132 1171 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 NPTXRO95502 500 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 PDE4BQ07343 736 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 PFKFB4Q16877 469 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 SHROOM1Q2M3G4 852 aaPredicted RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 TMEM214Q6NUQ4 689 aaKnown RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 DARS2Q6PI48 645 aaKnown RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 RTN4RL1Q86UN2 441 aaPredicted RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 RBM18Q96H35 190 aaKnown RBP9.63□□□□□ -0.87
VSIG1-201ENST00000217957 TMEM120AQ9BXJ8 343 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 STARD7Q9NQZ5 370 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
VSIG1-201ENST00000217957 BTBD11A6QL63 1104 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 MEIS3P2A8K0S8 358 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 CBX4O00257 560 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 AOC2O75106 756 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 CFBP00751 764 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 ATP6V1B1P15313 513 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 FBLN1P23142 703 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 SLC44A2Q8IWA5 706 aaPredicted RBP9.62□□□□□ -0.87
VSIG1-201ENST00000217957 SULF2Q8IWU5 870 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 TMEM145Q8NBT3 493 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 GTF3C4Q9UKN8 822 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 ZNF214Q9UL59 606 aaPredicted RBP9.62□□□□□ -0.87
VSIG1-201ENST00000217957 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 NUP188Q5SRE5 1749 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 KPNA1P52294 538 aaPredicted RBP9.62□□□□□ -0.87
VSIG1-201ENST00000217957 LRMPQ12912 555 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 RASA2Q15283 850 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 MAJINQ3KP22 176 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 TMEM192Q8IY95 271 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 XAGE2Q96GT9 111 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 CNTD2Q9H8S5 307 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 OBP2BQ9NPH6 170 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 IKBKGQ9Y6K9 419 aa9.62□□□□□ -0.87
VSIG1-201ENST00000217957 CEP152O94986 1710 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 FOXN3O00409 490 aaPredicted RBP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 ATE1O95260 518 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 HNRNPLP14866 589 aaKnown RBP eCLIP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 HSPA2P54652 639 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 DLGAP5Q15398 846 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 TSTQ16762 297 aaKnown RBP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 HSP90AB3PQ58FF7 597 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 ZCCHC2Q9C0B9 1178 aaKnown RBP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 KIF17Q9P2E2 1029 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 CICQ96RK0 1608 aaPredicted RBP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 K7ESF4 209 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 TSHRP16473 764 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 KCNJ6P48051 423 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 RELBQ01201 579 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 SMC1AQ14683 1233 aaKnown RBP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 TTC39AQ5SRH9 613 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 DENND1CQ8IV53 801 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 PRAM1Q96QH2 718 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
VSIG1-201ENST00000217957 EPN3Q9H201 632 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 L1RE1Q9UN81 338 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 CLTCL1P53675 1640 aa9.61□□□□□ -0.87
VSIG1-201ENST00000217957 A0A096LPE4 126 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 A0A1W2PPZ6 126 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 C19orf67A6NJJ6 358 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 PSAPP07602 524 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 PLCG1P19174 1290 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
VSIG1-201ENST00000217957 MTDHQ86UE4 582 aaKnown RBP9.6□□□□□ -0.87
VSIG1-201ENST00000217957 PNMA5Q96PV4 448 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 GHITMQ9H3K2 345 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 CYP26B1Q9NR63 512 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 GMIPQ9P107 970 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 VPS28Q9UK41 221 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 ASXL1Q8IXJ9 1541 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 CCT2P78371 535 aaKnown RBP9.6□□□□□ -0.87
VSIG1-201ENST00000217957 DENND5AQ6IQ26 1287 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 DAAM2Q86T65 1068 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 PTPRN2Q92932 1015 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 BORCS6Q96GS4 357 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 KNSTRNQ9Y448 316 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 CSADQ9Y600 493 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 PTPDC1A2A3K4 754 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 FAM234BA2RU67 622 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 PRAMEF27A3QJZ7 478 aa9.6□□□□□ -0.87
VSIG1-201ENST00000217957 KCNH1O95259 989 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms