RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 ARMCX3Q9UH62 379 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 CAPN11Q9UMQ6 739 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 EPN1Q9Y6I3 576 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 K7ENM7 598 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 ATP9AO75110 1047 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 EPB41P11171 864 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 MAGEA9P43362 315 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 CYP2J2P51589 502 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 ZBED6P86452 979 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 EHHADHQ08426 723 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 KCNA1Q09470 495 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 ITGB3BPQ13352 177 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 TUBB2AQ13885 445 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 SPA17Q15506 151 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 MIIPQ5JXC2 388 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 CCDC181Q5TID7 509 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 CEP112Q8N8E3 955 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 HNRNPLLQ8WVV9 542 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 CEP63Q96MT8 703 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 TUBB2BQ9BVA1 445 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 LSM14BQ9BX40 385 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 KIAA1522Q9P206 1035 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 WRAP73Q9P2S5 460 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 TMEM150BA6NC51 233 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 CCDC169A6NNP5 214 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 AKR1B10O60218 316 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 HIP1RO75146 1068 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 FAM102BQ5T8I3 360 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 TTC19Q6DKK2 380 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 LRRC55Q6ZSA7 311 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 EEPD1Q7L9B9 569 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 MAP3K20Q9NYL2 800 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 LARSQ9P2J5 1176 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 RRP15Q9Y3B9 282 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 AFG3L2Q9Y4W6 797 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 UBIAD1Q9Y5Z9 338 aa9.73□□□□□ -0.85
MTHFD1-201ENST00000216605 WDR64B1ANS9 1081 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 MAP2K7O14733 419 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 NR3C1P04150 777 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 SETSIPP0DME0 302 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 XRCC5P13010 732 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 YBX3P16989 372 aaKnown RBP eCLIP9.72□□□□□ -0.852e-7■□□□□ 9.5
MTHFD1-201ENST00000216605 NAP1L1P55209 391 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 CHMP4BP1P59074 171 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 GNPTABQ3T906 1256 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 TREML2Q5T2D2 321 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 SEPT14Q6ZU15 432 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 A1CFQ9NQ94 594 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 NDUFA10O95299 355 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 BCRP11274 1271 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 YWHABP31946 246 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 POLR2FP61218 127 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 ZFYVE27Q5T4F4 411 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 PLA2G4FQ68DD2 849 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 C1orf186Q6ZWK4 172 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 SRGAP1Q7Z6B7 1085 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 PROCA1Q8NCQ7 364 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 TACO1Q9BSH4 297 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 IKZF4Q9H2S9 585 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 ZNF214Q9UL59 606 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 SNCAIPQ9Y6H5 919 aa9.72□□□□□ -0.85
MTHFD1-201ENST00000216605 A0A0U1RQJ8 604 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 TUBBP07437 444 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 EPHX2P34913 555 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 NPEPPSP55786 919 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 KRT76Q01546 638 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 KCNH2Q12809 1159 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 RAPGEF1Q13905 1077 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 ATRIPQ8WXE1 791 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 SPAG5Q96R06 1193 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 ERGIC2Q96RQ1 377 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 GBP3Q9H0R5 595 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 KCTD10Q9H3F6 313 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 TYW1Q9NV66 732 aaKnown RBP9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 PCDHA2Q9Y5H9 948 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 EXOC3O60645 756 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 KRT83P78385 493 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 CYP27A1Q02318 531 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 EDRF1Q3B7T1 1238 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 SWSAP1Q6NVH7 229 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 MMS22LQ6ZRQ5 1243 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 NIPA1Q7RTP0 329 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 NHEJ1Q9H9Q4 299 aaPredicted RBP9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 CYP39A1Q9NYL5 469 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 VPS18Q9P253 973 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 NUB1Q9Y5A7 615 aa9.71□□□□□ -0.85
MTHFD1-201ENST00000216605 POLR2AP24928 1970 aaKnown RBP9.71□□□□□ -0.86
MTHFD1-201ENST00000216605 PDXKO00764 312 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms