RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 EIF3CQ99613 913 aaKnown RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 GANQ9H2C0 597 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 C17orf75Q9HAS0 396 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 PLCB1Q9NQ66 1216 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 ARHGAP20Q9P2F6 1191 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 CGNQ9P2M7 1197 aaKnown RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 SOCS7O14512 581 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 XKR3Q5GH77 459 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 ZNF662Q6ZS27 426 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 ILDR2Q71H61 639 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 CACNA2D4Q7Z3S7 1137 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 SYCP3Q8IZU3 236 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 SHCBP1Q8NEM2 672 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 SYN2Q92777 582 aaPredicted RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 KIFAP3Q92845 792 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 NTPCRQ9BSD7 190 aaKnown RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 IRX2Q9BZI1 471 aaPredicted RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 NUCKS1Q9H1E3 243 aaKnown RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 MROH8Q9H579 483 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 CYP26B1Q9NR63 512 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 GTPBP10A4D1E9 387 aaKnown RBP20.36■□□□□ 0.85
CTSA-201ENST00000191018 SORBS3O60504 671 aa20.36■□□□□ 0.85
CTSA-201ENST00000191018 DGAT1O75907 488 aa20.36■□□□□ 0.85
CTSA-201ENST00000191018 FARP2O94887 1054 aaPredicted RBP20.36■□□□□ 0.85
CTSA-201ENST00000191018 ATP4AP20648 1035 aa20.36■□□□□ 0.85
CTSA-201ENST00000191018 SNRPFP62306 86 aaKnown RBP20.36■□□□□ 0.85
CTSA-201ENST00000191018 ERVK-9P63128 1117 aa20.36■□□□□ 0.85
CTSA-201ENST00000191018 DCAF17Q5H9S7 520 aaPredicted RBP20.36■□□□□ 0.85
CTSA-201ENST00000191018 PNMA3Q9UL41 463 aa20.36■□□□□ 0.85
CTSA-201ENST00000191018 ABL1P00519 1130 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 RTP1P59025 263 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 KRT83P78385 493 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 NEDD9Q14511 834 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 KCTD2Q14681 263 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 ARHGAP29Q52LW3 1261 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 TMEM161BQ8NDZ6 487 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 MCPH1Q8NEM0 835 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 GTF3C2Q8WUA4 911 aaPredicted RBP20.35■□□□□ 0.85
CTSA-201ENST00000191018 SPIRE2Q8WWL2 714 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 HVCN1Q96D96 273 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 MS4A4AQ96JQ5 239 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 MMP19Q99542 508 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 XPNPEP1Q9NQW7 623 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 SEPT9Q9UHD8 586 aaPredicted RBP20.35■□□□□ 0.85
CTSA-201ENST00000191018 FRMD4BQ9Y2L6 1034 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 SLC16A4O15374 487 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 PGK2P07205 417 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 NPTX2P47972 431 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 CYP2J2P51589 502 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 POLR2FP61218 127 aaKnown RBP20.35■□□□□ 0.85
CTSA-201ENST00000191018 FKBP1BP68106 108 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 PPP2R5AQ15172 486 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 EXOC3L4Q17RC7 722 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 TCERG1LQ5VWI1 586 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 MPHOSPH6Q99547 160 aaKnown RBP20.35■□□□□ 0.85
CTSA-201ENST00000191018 NLRC4Q9NPP4 1024 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 ZNF302Q9NR11 478 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 SLC45A1Q9Y2W3 748 aa20.35■□□□□ 0.85
CTSA-201ENST00000191018 GSTTP1A0A1W2PQM5 241 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 KIF5CO60282 957 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 LCA5LO95447 670 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 PLEKP08567 350 aaPredicted RBP20.34■□□□□ 0.85
CTSA-201ENST00000191018 SLC9A1P19634 815 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 PON1P27169 355 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 CASQ1P31415 396 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 SMTNP53814 917 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 APBA1Q02410 837 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 HGSNATQ68CP4 663 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 MORC4Q8TE76 937 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 BSNDQ8WZ55 320 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 CCDC42Q96M95 316 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 HAUS4Q9H6D7 363 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 MYO1AQ9UBC5 1043 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 MCM3APO60318 1980 aa20.34■□□□□ 0.85
CTSA-201ENST00000191018 LOC102724159A0A0B4J2E5 919 aa20.33■□□□□ 0.85
CTSA-201ENST00000191018 CYP2C8P10632 490 aa20.33■□□□□ 0.85
CTSA-201ENST00000191018 DMP1Q13316 513 aaPredicted RBP20.33■□□□□ 0.85
CTSA-201ENST00000191018 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
CTSA-201ENST00000191018 PWP2Q15269 919 aaKnown RBP20.33■□□□□ 0.85
CTSA-201ENST00000191018 ATP6V0A4Q9HBG4 840 aa20.33■□□□□ 0.85
CTSA-201ENST00000191018 FBXL5Q9UKA1 691 aa20.33■□□□□ 0.85
CTSA-201ENST00000191018 SSU72P8A0A1W2PR75 194 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 ZNF263O14978 683 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 TLR2O60603 784 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 EXOC3O60645 756 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 OATP04181 439 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 CETPP11597 493 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 ASTE1Q2TB18 679 aaPredicted RBP20.33■□□□□ 0.84
CTSA-201ENST00000191018 KLHDC7AQ5VTJ3 777 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 METTL7BQ6UX53 244 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 GBP6Q6ZN66 633 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 MAP4K3Q8IVH8 894 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 PCYT2Q99447 389 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 TBX20Q9UMR3 447 aa20.33■□□□□ 0.84
CTSA-201ENST00000191018 PLXNB2O15031 1838 aa20.32■□□□□ 0.84
CTSA-201ENST00000191018 TISP43B9A030 160 aa20.32■□□□□ 0.84
CTSA-201ENST00000191018 SLU7O95391 586 aaKnown RBP20.32■□□□□ 0.84
CTSA-201ENST00000191018 SOX10P56693 466 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms