RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SURF1Q15526 300 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 GLYCTKQ8IVS8 523 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 DHX40Q8IX18 779 aaKnown RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 PDIK1LQ8N165 341 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 UBN1Q9NPG3 1134 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 TLK1Q9UKI8 766 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 CAMTA2O94983 1202 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 THOC5Q13769 683 aaKnown RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 SPOPLQ6IQ16 392 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 RAB3IPQ96QF0 476 aaPredicted RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 POLR3FQ9H1D9 316 aaPredicted RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 CDC42BPAQ5VT25 1732 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 DBN1Q16643 649 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 CHMP6Q96FZ7 201 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 MTRQ99707 1265 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
MBD3-201ENST00000156825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.2■□□□□ 0.829e-7■■□□□ 12
MBD3-201ENST00000156825 IGDCC4Q8TDY8 1250 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 PHLDB3Q6NSJ2 640 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 TMEM35BQ8NCS4 154 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 MTMR4Q9NYA4 1195 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 FLT1P17948 1338 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 HSPA6P17066 643 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 EPHB1P54762 984 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 ANKRD40Q6AI12 368 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 EXT2Q93063 718 aa20.2■□□□□ 0.82
MBD3-201ENST00000156825 DDX47Q9H0S4 455 aaKnown RBP20.2■□□□□ 0.82
MBD3-201ENST00000156825 VGLL3A8MV65 326 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 EIF3CLB5ME19 914 aaKnown RBP20.19■□□□□ 0.82
MBD3-201ENST00000156825 ITPK1Q13572 414 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 PARD3BQ8TEW8 1205 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 EIF3CQ99613 913 aaKnown RBP20.19■□□□□ 0.82
MBD3-201ENST00000156825 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 IRX2Q9BZI1 471 aaPredicted RBP20.19■□□□□ 0.82
MBD3-201ENST00000156825 NR1D1P20393 614 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 IL1RL1Q01638 556 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 SLMAPQ14BN4 828 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 PROM2Q8N271 834 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 SPATA33Q96N06 139 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 MLXIPLQ9NP71 852 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 SAYSD1Q9NPB0 183 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 ZNF34Q8IZ26 560 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 FBXO2Q9UK22 296 aaPredicted RBP20.19■□□□□ 0.82
MBD3-201ENST00000156825 FTLP02792 175 aaPredicted RBP20.19■□□□□ 0.82
MBD3-201ENST00000156825 PLS3P13797 630 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 OSBPL5Q9H0X9 879 aaPredicted RBP20.19■□□□□ 0.82
MBD3-201ENST00000156825 USP31Q70CQ4 1352 aa20.19■□□□□ 0.82
MBD3-201ENST00000156825 NDUFB10O96000 172 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 ANXA13P27216 316 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 GPC5P78333 572 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 E2F5Q15329 346 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 FAF2Q96CS3 445 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 EPB41L4AQ9HCS5 686 aaPredicted RBP20.18■□□□□ 0.82
MBD3-201ENST00000156825 TULP4Q9NRJ4 1543 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 EMSYQ7Z589 1322 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 PNMA6AP0CW24 399 aaPredicted RBP20.18■□□□□ 0.82
MBD3-201ENST00000156825 ACAD9Q9H845 621 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 OPHN1O60890 802 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 ABCD1P33897 745 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 HAUS6Q7Z4H7 955 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 SCINQ9Y6U3 715 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 ELF1P32519 619 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 PHKA2P46019 1235 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 RCAN1P53805 252 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 FOXD4Q12950 439 aaPredicted RBP20.18■□□□□ 0.82
MBD3-201ENST00000156825 CEP55Q53EZ4 464 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 LRRC43Q8N309 656 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 INTS2Q9H0H0 1204 aaKnown RBP20.18■□□□□ 0.82
MBD3-201ENST00000156825 PLAAQ9Y263 795 aa20.18■□□□□ 0.82
MBD3-201ENST00000156825 PSMC5P62195 406 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 ADGRG1Q9Y653 693 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 MICALL2Q8IY33 904 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 GUF1Q8N442 669 aaKnown RBP20.17■□□□□ 0.82
MBD3-201ENST00000156825 ANTXR2P58335 489 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 TSGA10IPQ3SY00 556 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 ZNF449Q6P9G9 518 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 DEPDC1BQ8WUY9 529 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 IQCB1Q15051 598 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 PPP1R18Q6NYC8 613 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 MTA3Q9BTC8 594 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 NUP85Q9BW27 656 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 TOPORSQ9NS56 1045 aaPredicted RBP20.17■□□□□ 0.82
MBD3-201ENST00000156825 BCAP29Q9UHQ4 241 aa20.17■□□□□ 0.82
MBD3-201ENST00000156825 ARHGEF6Q15052 776 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 FAM167AQ96KS9 214 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 FAM217BQ9NTX9 383 aaPredicted RBP20.16■□□□□ 0.82
MBD3-201ENST00000156825 PRKAG2Q9UGJ0 569 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 PI4K2BG5E9Z4 385 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 PIK3R2O00459 728 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 GPC3P51654 580 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 WHAMMQ8TF30 809 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 KLHL29Q96CT2 875 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 UBE4BO95155 1302 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 FRMD3A2A2Y4 597 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms