RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SCLT1Q96NL6 688 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
SYPL1-201ENST00000011473 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
SYPL1-201ENST00000011473 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
SYPL1-201ENST00000011473 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 NPHP3-ACAD11A0A0J9YXS1 232 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 CAND2O75155 1236 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 DNM2P50570 870 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 GPC3P51654 580 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 PPIGQ13427 754 aaKnown RBP eCLIP13.39□□□□□ -0.27
SYPL1-201ENST00000011473 MCM6Q14566 821 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 FAM102BQ5T8I3 360 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 NME8Q8N427 588 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 A0A087WZ62 844 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 LPIN1Q14693 890 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 FAM26DQ5JW98 314 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 PRPF38BQ5VTL8 546 aaKnown RBP13.38□□□□□ -0.27
SYPL1-201ENST00000011473 RRAGBQ5VZM2 374 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 PSPC1Q8WXF1 523 aaKnown RBP13.38□□□□□ -0.27
SYPL1-201ENST00000011473 RAD54LQ92698 747 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 JPH2Q9BR39 696 aaPredicted RBP13.38□□□□□ -0.27
SYPL1-201ENST00000011473 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
SYPL1-201ENST00000011473 POLR3FQ9H1D9 316 aaPredicted RBP13.38□□□□□ -0.27
SYPL1-201ENST00000011473 ADAMTS10Q9H324 1103 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
SYPL1-201ENST00000011473 COL4A3BPQ9Y5P4 624 aa13.38□□□□□ -0.27
SYPL1-201ENST00000011473 A0A1B0GVL5 298 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 CYP11B2P19099 503 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 FGFR4P22455 802 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 CD52P31358 61 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 LAMTOR4Q0VGL1 99 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 SHHQ15465 462 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 LARP4BQ92615 738 aaKnown RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 STAMQ92783 540 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 NOC2LQ9Y3T9 749 aaKnown RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 PPME1Q9Y570 386 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 KAT6AQ92794 2004 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 SFI1A8K8P3 1242 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 STAT6P42226 847 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 NFX1Q12986 1120 aaKnown RBP13.37□□□□□ -0.27
SYPL1-201ENST00000011473 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 RNF149Q8NC42 400 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 DHX58Q96C10 678 aa13.37□□□□□ -0.27
SYPL1-201ENST00000011473 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
SYPL1-201ENST00000011473 CXCL10P02778 98 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 GLRA2P23416 452 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 ARL2P36404 184 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 CRYBB1P53674 252 aaPredicted RBP13.36□□□□□ -0.27
SYPL1-201ENST00000011473 ADALQ6DHV7 355 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 GPBP1Q86WP2 473 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 RPUSD2Q8IZ73 545 aaKnown RBP13.36□□□□□ -0.27
SYPL1-201ENST00000011473 DAW1Q8N136 415 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 TCP11Q8WWU5 503 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 KIFC3Q9BVG8 833 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 TANC1Q9C0D5 1861 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 GAS2O43903 313 aaKnown RBP13.36□□□□□ -0.27
SYPL1-201ENST00000011473 HIP1RO75146 1068 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 RPLP2P05387 115 aaKnown RBP13.36□□□□□ -0.27
SYPL1-201ENST00000011473 PFKFB1P16118 471 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 RFC2P35250 354 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 CAPSQ13938 189 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 PLEKHG4Q58EX7 1191 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 TSHZ1Q6ZSZ6 1077 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 EXOC8Q8IYI6 725 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 PRO3102Q9H379 93 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 GOLPH3LQ9H4A5 285 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 MINDY3Q9H8M7 445 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
SYPL1-201ENST00000011473 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
SYPL1-201ENST00000011473 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
SYPL1-201ENST00000011473 FGBP02675 491 aa13.35□□□□□ -0.27
SYPL1-201ENST00000011473 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
SYPL1-201ENST00000011473 PAK2Q13177 524 aa13.35□□□□□ -0.27
SYPL1-201ENST00000011473 E2F4Q16254 413 aa13.35□□□□□ -0.27
SYPL1-201ENST00000011473 TMCO2Q7Z6W1 182 aaPredicted RBP13.35□□□□□ -0.27
SYPL1-201ENST00000011473 FAM228AQ86W67 206 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms