RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.23■□□□□ 0.03
USH1C-201ENST00000005226 SCLT1Q96NL6 688 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 EPB41L4BQ9H329 900 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 TYW1Q9NV66 732 aaKnown RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 ARFGEF1Q9Y6D6 1849 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 SCTRP47872 440 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 MARCKSL1P49006 195 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 GSCP56915 257 aaPredicted RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 DR1Q01658 176 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 MTMR3Q13615 1198 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 DOK7Q18PE1 504 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 GPATCH4Q5T3I0 446 aaKnown RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 EIF1ADQ8N9N8 165 aaKnown RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 TATDN2Q93075 761 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 LENG9Q96B70 501 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 RNF25Q96BH1 459 aaPredicted RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 MSH4O15457 936 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 TBCAO75347 108 aaKnown RBP15.22■□□□□ 0.03
USH1C-201ENST00000005226 EEF2P13639 858 aaKnown RBP15.22■□□□□ 0.03
USH1C-201ENST00000005226 KRT13P13646 458 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 CHN1P15882 459 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 RPA1P27694 616 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 SOX5P35711 763 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 E2F5Q15329 346 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 CPNE8Q86YQ8 564 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 FUKQ8N0W3 1084 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 MYCT1Q8N699 235 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 FBXO25Q8TCJ0 367 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 C18orf8Q96DM3 657 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 AZI2Q9H6S1 392 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 FAM114A2Q9NRY5 505 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 FERP16591 822 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 HOXA7P31268 230 aaPredicted RBP15.22■□□□□ 0.03
USH1C-201ENST00000005226 DDR1Q08345 913 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 IKQ13123 557 aaPredicted RBP15.22■□□□□ 0.03
USH1C-201ENST00000005226 CYB5D1Q6P9G0 228 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
USH1C-201ENST00000005226 SLFN12Q8IYM2 578 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 SYCE1Q8N0S2 351 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 XPO6Q96QU8 1125 aaKnown RBP15.22■□□□□ 0.03
USH1C-201ENST00000005226 CXorf56Q9H5V9 222 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 DAAM1Q9Y4D1 1078 aa15.22■□□□□ 0.03
USH1C-201ENST00000005226 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
USH1C-201ENST00000005226 CDR1P51861 262 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 CCDC38Q502W7 563 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 GKAP1Q5VSY0 366 aaPredicted RBP15.21■□□□□ 0.03
USH1C-201ENST00000005226 SLFN13Q68D06 897 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 ZNF746Q6NUN9 644 aaPredicted RBP15.21■□□□□ 0.03
USH1C-201ENST00000005226 TPH2Q8IWU9 490 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 SLC20A1Q8WUM9 679 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 KRT35Q92764 455 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 HVCN1Q96D96 273 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 BORCS6Q96GS4 357 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 ZDHHC18Q9NUE0 388 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 GGT7Q9UJ14 662 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
USH1C-201ENST00000005226 CYP3A7-CYP3A51PA0A087WV96 503 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 CHUKO15111 745 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 PPFIA2O75334 1257 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 CYP3A7P24462 503 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 IFNAR2P48551 515 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 UBXN2AP68543 259 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 PPATQ06203 517 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 SLC29A2Q14542 456 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 DUPD1Q68J44 220 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 CTNNBL1Q8WYA6 563 aaPredicted RBP15.21■□□□□ 0.02
USH1C-201ENST00000005226 SEC14L1Q92503 715 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.02
USH1C-201ENST00000005226 ERP44Q9BS26 406 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 TXLNGYQ9BZA5 131 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 GPR88Q9GZN0 384 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 SEMA4AQ9H3S1 761 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 DNAJC18Q9H819 358 aa15.21■□□□□ 0.02
USH1C-201ENST00000005226 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.02
USH1C-201ENST00000005226 TNFAIP3P21580 790 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 RDXP35241 583 aaKnown RBP15.2■□□□□ 0.02
USH1C-201ENST00000005226 RINT1Q6NUQ1 792 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 CDC42EP5Q6NZY7 148 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 PARP9Q8IXQ6 854 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 ZDHHC14Q8IZN3 488 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 ERMNQ8TAM6 284 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 TLCD1Q96CP7 247 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 METTL14Q9HCE5 456 aaKnown RBP15.2■□□□□ 0.02
USH1C-201ENST00000005226 GGA2Q9UJY4 613 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 A0A0A6YYK5 440 aaPredicted RBP15.2■□□□□ 0.02
USH1C-201ENST00000005226 FOXO6A8MYZ6 492 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
USH1C-201ENST00000005226 FMO5P49326 533 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 PMS2P54278 862 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms