RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Akap3O88987 864 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Pcif1P59114 706 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Rit2P70425 217 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Rufy4Q3TYX8 563 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Slc9a2Q3ZAS0 814 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Jak2Q62120 1129 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ptpn14Q62130 1189 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Dnaaf2Q8BPI1 814 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Plekhs1Q8BW88 474 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Zbtb49Q8BXX2 756 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Mtif3Q9CZD5 276 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 GdaQ9R111 454 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 CcnoP0C242 352 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 PrkceP16054 737 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Mmp3P28862 477 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 ArvcfP98203 962 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 St3gal2Q11204 350 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Lrrfip1Q3UZ39 729 aaKnown RBP16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Lrrc36Q3V0M2 755 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Tnni3kQ5GIG6 834 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 PoliQ6R3M4 717 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Sbk1Q8QZX0 417 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Eif4enif1Q9EST3 983 aaKnown RBP16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Tfr2Q9JKX3 798 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Tob2Q9JM55 345 aa16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 AdnpQ9Z103 1108 aaKnown RBP16.29■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Gm7356A0A087WSA6 508 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Lmod3E9QA62 571 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Psmc3O88685 442 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ptpn5P54830 541 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Smpd1Q04519 627 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Gas7Q60780 421 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Madcam1Q61826 405 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Nsun6Q7TS68 476 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Rd3Q8BRE0 195 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Trim47Q8C0E3 641 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Vps52Q8C754 723 aaKnown RBP16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ccdc71Q8VEG0 433 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Cxxc1Q9CWW7 660 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 GatmQ9D964 423 aaKnown RBP16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Gde1Q9JL56 331 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Cdc45Q9Z1X9 566 aa16.28■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ttll8A4Q9F1 832 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 UgcgO88693 394 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Vti1aO89116 217 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Dnm2P39054 870 aaKnown RBP16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 PklrP53657 574 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Plppr4Q7TME0 766 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Zscan4cQ80VJ6 506 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Unc93b1Q8VCW4 598 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ppp6r3Q922D4 844 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Syde1Q9DBZ9 737 aa16.27■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Tp53bp1P70399 1969 aa16.27■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Fibcd1A2AV25 459 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Fbxl16A2RT62 479 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Zscan20B2KFW1 1030 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 TertO70372 1122 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Chrna1P04756 457 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Drp2Q05AA6 957 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Snx27Q3UHD6 539 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Mpzl3Q3V3F6 237 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Sgsm2Q80U12 1005 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 C2cd2lQ80X80 706 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Saal1Q9D2C2 474 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Ephx1Q9D379 455 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 KnstrnQ9D9Z1 312 aaKnown RBP16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Nmnat1Q9EPA7 285 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 NcdnQ9Z0E0 729 aa16.26■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Fam170bE9PXT9 378 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 GclmO09172 274 aaKnown RBP16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Xrcc6P23475 608 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Rplp2P99027 115 aaKnown RBP16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Nucb1Q02819 459 aaKnown RBP16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 GaltQ03249 379 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Kcnma1Q08460 1209 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Znf827Q505G8 1078 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Cyp2c66Q5GLZ0 490 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Acot5Q6Q2Z6 421 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Suz12Q80U70 741 aaKnown RBP16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Shc2Q8BMC3 573 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Kcnv1Q8BZN2 503 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 MiosQ8VE19 875 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Slc25a38Q91XD8 326 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Ndufb9Q9CQJ8 179 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Cntn6Q9JMB8 1028 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Pcsk5Q04592 1877 aa16.25■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 CntrlA2AL36 2334 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Gm11236J3QMS7 360 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 PrnpP04925 254 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Lrrc4bP0C192 709 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Sash1P59808 1230 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Hexim2Q3TVI4 313 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Xkr4Q5GH67 647 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 LbpQ61805 481 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Nod1Q8BHB0 953 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Ranbp6Q8BIV3 1105 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Amz1Q8BVF9 502 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Nat10Q8K224 1024 aaKnown RBP16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Znf445Q8R2V3 986 aa16.24■□□□□ 0.19
Ccdc88c-204ENSMUST00000223097 Lrrc2Q8VDB8 371 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms