RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Otub1Q7TQI3 271 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Arhgap25Q8BYW1 648 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Pde10aQ8CA95 790 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 PygbQ8CI94 843 aaKnown RBP9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Mmgt1Q8K273 131 aaKnown RBP9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Gps1Q99LD4 471 aaKnown RBP9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Lonrf3Q9D4H7 753 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Mrps15Q9DC71 258 aaKnown RBP9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Jph2Q9ET78 696 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Krt16Q9Z2K1 469 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Talpid3E9PV87 1520 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Ncoa3O09000 1398 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Frmpd4A2AFR3 1320 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Gm36028A0A0U1RPM1 299 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Gm5926E9PWJ8 236 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Stag2O35638 1231 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Tom1O88746 492 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Dynlt1P51807 113 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Cct7P80313 544 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Kcnk9Q3LS21 402 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Znf652Q5DU09 608 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Ddx5Q61656 614 aaKnown RBP9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Klhdc10Q6PAR0 439 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Fra10ac1Q8BP78 315 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Spice1Q8C804 860 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Kcnv2Q8CFS6 562 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 CopaQ8CIE6 1224 aaKnown RBP9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Haus3Q8QZX2 570 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Rpa3Q9CQ71 121 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Q9CQF4 240 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Caln1Q9JJG7 219 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Phf2Q9WTU0 1096 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Eif2ak1Q9Z2R9 619 aa9.67□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Armc3A2AU72 881 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Casp1P29452 402 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Sipa1P46062 1037 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Sesn2P58043 480 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Afap1l2Q5DTU0 825 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 CcnyQ8BGU5 341 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Abcf3Q8K268 709 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Snx2Q9CWK8 519 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Rmdn1Q9DCV4 305 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Tk2Q9R088 270 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Skint5A7XUY5 1461 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 PalldQ9ET54 1408 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Scgb2b21A0A087WQA9 112 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Rexo5D3YW29 759 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Gm3402K7N5P2 326 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Akap10O88845 662 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Sox6P40645 827 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Ppp3ccP48455 513 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Faf2Q3TDN2 445 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Rrp36Q3UFY0 244 aaKnown RBP9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Dmc1Q61880 340 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 ThemisQ8BGW0 636 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Ppp4r4Q8C0Y0 875 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Tut1Q8R3F9 869 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Alg1Q921Q3 482 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 NvlQ9DBY8 855 aaKnown RBP9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Atp6v1g2Q9WTT4 118 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Thoc2B1AZI6 1594 aaKnown RBP9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Gm8257E9Q8R3 264 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 LtkP08923 888 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Zfy1P10925 782 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Sar1aP36536 198 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Trim43bP86448 445 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Mcl1P97287 331 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Meis1Q60954 390 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 CtcfQ61164 736 aaKnown RBP9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Zbtb40Q6PCS8 1258 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Tmem192Q9CXT7 266 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Usp29Q9ES63 869 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Ddx25Q9QY15 484 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Cfap74Q3UY96 1578 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Arhgef37A1IGU4 676 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Tubb1A2AQ07 451 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 A530032D15RikE9Q422 215 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Sgo2bJ3QMK1 1167 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Gm8897L7N294 181 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 H2afxP27661 143 aaKnown RBP9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Mybl1P51960 751 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Fam47cQ14BE7 430 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Trim72Q1XH17 477 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 InscQ3HNM7 579 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Phf21aQ6ZPK0 659 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Ccdc134Q8C7V8 229 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 P3h2Q8CG71 703 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Cnot3Q8K0V4 751 aaKnown RBP9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Rbm43Q99J64 343 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Dmrtc1Q9D9R7 182 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Spag6Q9JLI7 507 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Cdkl2Q9QUK0 568 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Tex21Q9R0U9 575 aa9.66□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Trim15G3UY57 292 aa9.65□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Pde6bP23440 856 aa9.65□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Krt6aP50446 553 aa9.65□□□□□ -0.86
Ptpre-204ENSMUST00000209979 VcpQ01853 806 aaKnown RBP9.65□□□□□ -0.86
Ptpre-204ENSMUST00000209979 WaplQ65Z40 1200 aaKnown RBP9.65□□□□□ -0.86
Ptpre-204ENSMUST00000209979 HelbQ6NVF4 1074 aa9.65□□□□□ -0.86
Ptpre-204ENSMUST00000209979 Znf451Q8C0P7 1056 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms