RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Klhl7Q8BUL5 586 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gpcpd1Q8C0L9 675 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 PreplQ8C167 725 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Lsm14bQ8CGC4 385 aaKnown RBP11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Parp10Q8CIE4 960 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 MetrnlQ8VE43 311 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 GneQ91WG8 722 aaKnown RBP11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rnf34Q99KR6 376 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Kif17Q99PW8 1038 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Tmed5Q9CXE7 229 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 ErmapQ9JLN5 566 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Entpd5Q9WUZ9 427 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gm6121L7MUF1 212 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fam207aP58468 219 aaKnown RBP11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Syne3Q4FZC9 975 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Elf1Q60775 612 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Kcnj11Q61743 390 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nlrp4fQ66X05 959 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Slc39a11Q8BWY7 342 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gramd4Q8CB44 633 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fam193aQ8CGI1 1231 aaKnown RBP11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Cfap53Q9D439 514 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Tacc3Q9JJ11 631 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ankrd2Q9WV06 328 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Letm1Q9Z2I0 738 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Myh4Q5SX39 1939 aa11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Znfx1Q8R151 1909 aaKnown RBP11.12□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ano3A2AHL1 981 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Dcaf10A2AKB9 566 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Trappc11B2RXC1 1133 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 TyrobpO54885 114 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Pgrmc1O55022 195 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 LdhaP06151 332 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Msh2P43247 935 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Casp4P70343 373 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Atp11aP98197 1187 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gas1Q01721 343 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc138Q0VF22 680 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 ChukQ60680 745 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rasa3Q60790 834 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Trpc6Q61143 930 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 EregQ61521 162 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 WlsQ6DID7 541 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fmnl3Q6ZPF4 1028 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Pja2Q80U04 707 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 C2cd2lQ80X80 706 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rnaseh2bQ80ZV0 308 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Igdcc3Q8BQC3 813 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Aldh5a1Q8BWF0 523 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Cdan1Q8CC12 1239 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 SltmQ8CH25 1031 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 AagabQ8R2R3 316 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Pcdha5Q91Y15 934 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 PdhbQ9D051 359 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc105Q9D4K7 499 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Lamb1P02469 1786 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nup98Q6PFD9 1816 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 A0A286YCQ6 122 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gm14525B1AZA0 212 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gm2012B1B0R1 212 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nova2D3YVV7 556 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gm7347D3YYI9 267 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Wdr72D3YYM4 1114 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Zfp651E9PZ11 729 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Akr1c19G3X9Y6 323 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nfil3O08750 462 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Parp2O88554 559 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Men1O88559 611 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Cd44P15379 778 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 VimP20152 466 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 M6prP24668 278 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Serpinc1P32261 465 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sash1P59808 1230 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Atp8a1P70704 1164 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 SpertQ32MG2 446 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Tnfaip8l3Q3TBL6 204 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 VeztQ3ZK22 780 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Tnni3kQ5GIG6 834 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gm14819Q62478 212 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Trim37Q6PCX9 961 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Lca5Q80ST9 704 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fgd5Q80UZ0 1219 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Acad11Q80XL6 779 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Kctd3Q8BFX3 815 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Bola2Q8BGS2 86 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fam228aQ8CDW1 299 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc28bQ8CEG5 200 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ppp1r11Q8K1L5 131 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Bbs7Q8K2G4 715 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Il17cQ8K4C5 194 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 SncbQ91ZZ3 133 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sf3b3Q921M3 1217 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Xpo6Q924Z6 1125 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sh3bp5lQ99LH9 392 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Mageb16Q9CWV4 363 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 AacsQ9D2R0 672 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Lonrf3Q9D4H7 753 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Mzb1Q9D8I1 188 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sertad2Q9JJG5 309 aa11.11□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sel1lQ9Z2G6 790 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms