RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Lamb2Q61292 1799 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Fam214aQ69ZK7 1075 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Cep70Q6IQY5 616 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ctdp1Q7TSG2 960 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 TbckQ8BM85 762 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tmem161bQ8C2L6 487 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tspan8Q8R3G9 235 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Zcchc18Q8VD24 393 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Asic2Q925H0 512 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Mageb16Q9CWV4 363 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Btbd19S4R1I0 287 aa28.11■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Slc4a9E9PUP3 929 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Mov10P23249 1004 aaKnown RBP28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Stat4P42228 749 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ccdc102aQ3TMW1 549 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Capn13Q3UW68 665 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ece1Q4PZA2 769 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ints8Q80V86 995 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Hgh1Q8C3I8 393 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 BrdtQ91Y44 956 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Polr3fQ921X6 316 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 ChmQ9QXG2 665 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Cxcl9P18340 126 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ddx3yQ62095 658 aaKnown RBP28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Kiaa0754Q69ZZ9 979 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Sh3d21Q7TSG5 549 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Slc45a1Q8BIV7 751 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Iqcb1Q8BP00 598 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Fgd4Q91ZT5 766 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tnpo2Q99LG2 887 aaKnown RBP28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Emc2Q9CRD2 297 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Snx10Q9CWT3 201 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 NapgQ9CWZ7 312 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ggps1Q9WTN0 300 aa28.1■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Nkx2-5P42582 318 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Il6stQ00560 917 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Smyd5Q3TYX3 416 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Plppr4Q7TME0 766 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Acad11Q80XL6 779 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ttc7aQ8BGB2 858 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ppfibp1Q8C8U0 969 aaKnown RBP28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ddx41Q91VN6 622 aaKnown RBP28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Rpf2Q9JJ80 306 aaKnown RBP28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Col4a3Q9QZS0 1669 aa28.09■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Gm8298J3QPI0 401 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Sema4dO09126 861 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Actn4P57780 912 aaKnown RBP28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Cct6aP80317 531 aaKnown RBP28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Sec31aQ3UPL0 1230 aaKnown RBP28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Btg1-ps1Q3V0S2 161 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Btg1-ps2Q3V0X0 161 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ddr2Q62371 854 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tmem132aQ922P8 1018 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Fam111aQ9D2L9 613 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tubb2aQ7TMM9 445 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Cbwd1Q8VEH6 393 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Dbndd2Q9CRD4 158 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tubb2bQ9CWF2 445 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Prpf40aQ9R1C7 953 aaKnown RBP28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Mtmr1Q9Z2C4 669 aa28.08■■■□□ 2.09
Tpm1-216ENSMUST00000113707 1700016G14RikA0A286YCZ6 238 aa28.07■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Uri1Q3TLD5 531 aa28.07■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Sema5bQ60519 1093 aa28.07■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Mcph1Q7TT79 822 aa28.07■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Sh2b2Q9JID9 621 aa28.07■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Gm21973F6WEZ7 68 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Prl6a1O35257 230 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Calb1P12658 261 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Lta4hP24527 611 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 RenbpP82343 430 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 SelpQ01102 768 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Cyp11b1Q3TG86 501 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Cct6bQ61390 531 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Cse1lQ9ERK4 971 aaKnown RBP28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Pth1rP41593 591 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 StamP70297 548 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Ankrd13cQ3UX43 541 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Cd37Q61470 281 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Zbtb5Q7TQG0 670 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Slc9a9Q8BZ00 644 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Rapgef5Q8C0Q9 814 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 PdxkQ8K183 312 aa28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Bzw2Q91VK1 419 aaKnown RBP28.06■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Irf3P70671 419 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 R3hdm4Q4VBF2 262 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Acot11Q8VHQ9 594 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 NptxrQ99J85 493 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Mxra8Q9DBV4 442 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Sertad2Q9JJG5 309 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Prg3Q9JL95 222 aa28.05■■■□□ 2.08
Tpm1-216ENSMUST00000113707 ErmardE9Q048 622 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Slc3a2P10852 526 aaKnown RBP28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 AdssP46664 456 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Paxbp1P58501 919 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Klra9Q2TJJ8 266 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Cdc23Q8BGZ4 597 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Gys2Q8VCB3 704 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Creb3l3Q91XE9 479 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Ino80bQ99PT3 375 aaKnown RBP28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Sdr42e1Q9D665 394 aa28.04■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms