RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 PdhbQ9D051 359 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 LrgukQ9D5S7 820 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Rbp7Q9EPC5 134 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ing2Q9ESK4 281 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 IcoslgQ9JHJ8 322 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Dnajc12Q9R022 198 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Med14A2ABV5 1459 aaKnown RBP13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Arhgap23Q69ZH9 1483 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Usp53P15975 1069 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ddx17Q501J6 650 aaKnown RBP13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 PhkbQ7TSH2 1085 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Kbtbd3Q8BHI4 607 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Slc25a24Q8BMD8 475 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Bbs7Q8K2G4 715 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ap3m2Q8R2R9 418 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Plcb4Q91UZ1 1175 aa13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 CoblQ5NBX1 1337 aaKnown RBP13.24□□□□□ -0.29
Ssh1-202ENSMUST00000112298 SftpbP50405 377 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Lrig2Q52KR2 1054 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Trim56Q80VI1 734 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Q8C5C9 218 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Olfr390Q8VEZ7 311 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ola1Q9CZ30 396 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Pramef12Q9D2F1 463 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Lrriq1Q0P5X1 1673 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Mageb2A2AHM0 380 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Dthd1E9PZX1 795 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Lnx1O70263 728 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ces3aQ63880 571 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 RgmbQ7TQ33 436 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Unc45bQ8CGY6 931 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ces3bQ8VCU1 571 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Fads3Q9JJE7 449 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Rhot1Q8BG51 631 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ccz1Q8C1Y8 480 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 NemfQ8CCP0 1064 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Fam160b1Q8CDM8 764 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 P3h2Q8CG71 703 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Srgap2Q91Z67 1071 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 MajinQ9D992 256 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Tlr2Q9QUN7 784 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 ErmardE9Q048 622 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Soat2O88908 525 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 D1Pas1P16381 660 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Alppl2P24823 529 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Zfp418Q8BFS8 652 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Strip1Q8C079 837 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 McamQ8R2Y2 648 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ddah1Q9CWS0 285 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Magi2Q9WVQ1 1275 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 MeiocA2AG06 965 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gfpt1P47856 697 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ext2P70428 718 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 NpeppsQ11011 920 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gm10392Q3V3I3 114 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 NfrkbQ6PIJ4 1296 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Krt75Q8BGZ7 551 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Arid5bQ8BM75 1188 aaKnown RBP13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Plekha4Q8VC98 588 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Tmem206Q9D771 350 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Pcsk1nQ9QXV0 258 aa13.23□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gm7168A0AUV4 508 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Cyp3a59D3Z2W7 503 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 IqcmQ149I8 489 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Acot6Q32Q92 419 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 PighQ5M9N4 188 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Irak1Q62406 710 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Apol9bQ8C7I4 310 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Apol9aQ8VDU3 310 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 IkbipQ9DBZ1 373 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Tjap1Q9DCD5 539 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Eif4enif1Q9EST3 983 aaKnown RBP13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 ErmapQ9JLN5 566 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Anapc7Q9WVM3 565 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Abcc3B2RX12 1523 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Impdh2P24547 514 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Usp10P52479 792 aaKnown RBP13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Armc7Q3UJZ3 198 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Hipk4Q3V016 616 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Adgrg6Q6F3F9 1165 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Vipas39Q8BGQ1 491 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Slc7a14Q8BXR1 771 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Mrpl47Q8K2Y7 252 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Itpripl1A2ASA8 547 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ifnb1P01575 182 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Nr5a1P33242 462 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Hsph1Q61699 858 aaKnown RBP13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Hoxa13Q62424 386 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Stambpl1Q76N33 436 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Hpcal4Q8BGZ1 191 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Mb21d2Q8C525 428 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Pnpt1Q8K1R3 783 aaKnown RBP13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Tmem134Q8R0J4 195 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Cgref1Q8R1U2 281 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Zkscan3Q91VW9 553 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gja10Q9WUS4 505 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Zscan12Q9Z1D7 501 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Nccrp1G3X9C2 266 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Sh3gl1Q62419 368 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Phactr3Q8BYK5 558 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms