RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Acot11Q8VHQ9 594 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Dtnbp1Q91WZ8 352 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Mphosph6Q9D1Q1 161 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Hsd3b7Q9EQC1 369 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 NsfP46460 744 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 MlxipQ2VPU4 917 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Acsbg2Q2XU92 667 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Cyp11b1Q3TG86 501 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tatdn3Q3U1C6 294 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Vmn1r209Q5NC97 312 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 A1cfQ5YD48 595 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tspyl5Q69ZB3 406 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Phf8Q80TJ7 1023 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Znf365Q8BG89 408 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Scfd1Q8BRF7 639 aaKnown RBP9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ythdf3Q8BYK6 585 aaKnown RBP9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ccdc80Q8R2G6 949 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Trim60Q8VI40 466 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Foxp3Q99JB6 429 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Sugt1Q9CX34 336 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Zcrb1Q9CZ96 217 aaKnown RBP9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Rnf6Q9DBU5 667 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Prl2c5Q9JLV9 222 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 SmapQ9R0P4 181 aaKnown RBP9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Trim10Q9WUH5 489 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm9774A0A0A6YVU8 407 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm45208A0A140LJ36 292 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Cpb1B2RS76 415 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Krt13P08730 437 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lrch1P62046 709 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Znf652Q5DU09 608 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Sh3gl2Q62420 352 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Adgrg6Q6F3F9 1165 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 AmphQ7TQF7 686 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Celf4Q7TSY6 486 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ms4a5Q810P8 197 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm5622Q810Q0 167 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 HyiQ8R1F5 277 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lrrc8cQ8R502 803 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 IscuQ9D7P6 168 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Cpb2Q9JHH6 422 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Uchl3Q9JKB1 230 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lbhd1A0A087WPA0 259 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Cyb5rlB1AS42 316 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Dnaaf5B9EJR8 853 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Flot1O08917 428 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Serpina1aP07758 413 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 NppbP40753 121 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Jdp2P97875 163 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Serpina1cQ00896 412 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Serpina1dQ00897 413 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ttf2Q5NC05 1138 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Oca2Q62052 833 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Hoxa13Q62424 386 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Sp4Q62445 782 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Rab34Q64008 259 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Znf280dQ68FE8 974 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Vat1lQ80TB8 417 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Rnaseh2bQ80ZV0 308 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Lgi2Q8K4Z0 550 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Slf1Q8R3P9 1054 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Nrxn3Q6P9K9 1571 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Fam129cD3YZB0 591 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 CraddO88843 199 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Eps15P42567 897 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 ItgaeQ60677 1167 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Rgl1Q60695 768 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ppp2r5aQ6PD03 486 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ttc7aQ8BGB2 858 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Spdl1Q923A2 608 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Snx1Q9WV80 522 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Gm36210A0A1B0GS00 229 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Cdr1E9Q0B4 517 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Adam7O35227 789 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Xirp1O70373 1129 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Klc1O88447 541 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Adcy7P51829 1099 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Nt5c2Q3V1L4 560 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Churc1Q6DG52 112 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Clca4aQ6Q473 924 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Sap130Q8BIH0 1057 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 PreplQ8C167 725 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Calhm6Q8C9E8 313 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 NkapQ9D0F4 415 aaKnown RBP9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tktl2Q9D4D4 627 aa9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Orc1Q9Z1N2 840 aaKnown RBP9.02□□□□□ -0.97
Bdnf-210ENSMUST00000111051 6030498E09RikB1AX85 169 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 PrphP15331 475 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Slc1a1P51906 523 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Znf697Q569E7 569 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Lrig3Q6P1C6 1117 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Llgl1Q80Y17 1036 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 BC048507Q80ZS7 89 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Q8BGD0 127 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Aldh5a1Q8BWF0 523 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Parp10Q8CIE4 960 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ubxn6Q99PL6 442 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Lrrc57Q9D1G5 239 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Acot3Q9QYR7 432 aa9.01□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Zfp984A2A7A2 547 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms