RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Serpina16D3Z660 418 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 SprtnG3X912 497 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Tmem109Q3UBX0 243 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Mkrn3Q60764 544 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 ChpfQ6IQX7 774 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Stoml1Q8CI66 399 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Vwa1Q8R2Z5 415 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Olfr395Q8VGR3 312 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Rab30Q923S9 203 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Emc2Q9CRD2 297 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Fut2Q9JL27 347 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Plcb1Q9Z1B3 1216 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Fam205aA2APU8 1308 aa23.17■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 PcntP48725 2898 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Gucy2dA0A0U1RPR8 1117 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Ttll6A4Q9E8 822 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Cer1O55233 272 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Ppp1r13bQ62415 1087 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 RragbQ6NTA4 374 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Tmc3Q7TQ69 1130 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Zfp120Q8BZW4 436 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Rec8Q8C5S7 591 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Krt79Q8VED5 531 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Cwh43Q91YL7 699 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Josd2Q9CR30 188 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Rab27aQ9ERI2 221 aa23.16■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Cyp4a29A0A087WPC3 509 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Tnni3P48787 211 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 TdgP56581 421 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Xkr4Q5GH67 647 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Thap3Q8BJ25 218 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Ccdc113Q8C5T8 377 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Tbc1d10cQ8C9V1 444 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 E2f4Q8R0K9 410 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Washc1Q8VDD8 475 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Polr2dQ9D7M8 142 aaKnown RBP23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 PigoQ9JJI6 1093 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 PorcnQ9JJJ7 461 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Dnajb7Q9QYI8 312 aa23.15■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Myh11O08638 1972 aa23.14■■□□□ 1.3
Ssbp4-201ENSMUST00000049908 Gm11985A0A1B0GS61 206 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Atp2b1G5E829 1220 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Slc16a2O70324 545 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 RabggtbP53612 339 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Etv6P97360 485 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Ano7Q14AT5 859 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Defb25Q30KN8 71 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Uimc1Q5U5Q9 727 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Sh3tc2Q80VA5 1289 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Fbxl21Q8BFZ4 434 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Prrg2Q8R182 198 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Snw1Q9CSN1 536 aaKnown RBP23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Slc15a2Q9ES07 729 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Morc1Q9WVL5 950 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Malrd1A2AJX4 2123 aa23.14■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 PotegA5H0M4 473 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Xpnpep3B7ZMP1 506 aaKnown RBP23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 CiitaP79621 1155 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Trim37Q6PCX9 961 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Clec16aQ80U30 1036 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Slc38a7Q8BWH0 463 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Prpf31Q8CCF0 499 aaKnown RBP23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Glis1Q8K1M4 789 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Dqx1Q924H9 718 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Lrrc46Q9DAP0 323 aa23.13■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Ttll8A4Q9F1 832 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Axin1O35625 863 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Chrna1P04756 457 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Msh3P13705 1091 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Dlg3P70175 849 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Mpzl3Q3V3F6 237 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Nudt16Q6P3D0 195 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Zfp202Q8C879 641 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Upb1Q8VC97 393 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Hnrnpul1Q8VDM6 859 aaKnown RBP23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Ttyh1Q9D3A9 450 aa23.12■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Cfap58B2RW38 873 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Gm4841E9QAA8 417 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Kdelc2G5E897 503 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Sema5bQ60519 1093 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Znf280dQ68FE8 974 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 DekQ7TNV0 380 aaKnown RBP23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Gprc5aQ8BHL4 356 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Smarcal1Q8BJL0 910 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Krt36B1AQ75 473 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Zscan29E9Q5B4 869 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Rgs2O08849 211 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Tnfaip1O70479 316 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Clec11aO88200 328 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Exoc3Q6KAR6 755 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Cypt4Q6P925 153 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Suz12Q80U70 741 aaKnown RBP23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Eya4Q9Z191 616 aa23.11■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Cep350E9Q309 3095 aa23.1■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Cul4bA2A432 970 aaKnown RBP23.1■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Acad12D3Z7X0 555 aa23.1■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Casp14O89094 257 aa23.1■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Ogfod1Q3U0K8 545 aa23.1■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Gse1Q3U3C9 1213 aa23.1■■□□□ 1.29
Ssbp4-201ENSMUST00000049908 Gas2l3Q3UWW6 683 aa23.1■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms