RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Guca2bO09051 106 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Myo1aO88329 1043 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lrrc6O88978 473 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Trim71Q1PSW8 855 aaKnown RBP9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Slc30a9Q5IRJ6 567 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lyve1Q8BHC0 318 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lsm14bQ8CGC4 385 aaKnown RBP9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Agr3Q8R3W7 165 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc125Q5U465 500 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ppp1r13bQ62415 1087 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Nup58Q8R332 587 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pls3Q99K51 630 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 EcsitQ9QZH6 435 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm43638A0A0J9YU36 694 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dnajc5P60904 198 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Bcap29Q61334 240 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Epn1Q80VP1 575 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mgea5Q9EQQ9 916 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rtl9Q32KG4 1339 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Myo10F8VQB6 2062 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Baz2bA2AUY4 2123 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Kcnh4A2A5F7 1018 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mmrn2A6H6E2 943 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc153P0C7Q1 202 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tcp11Q01755 566 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Acbd5Q5XG73 508 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fnbp1Q80TY0 616 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 1700013H16RikQ9DAC5 291 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pou6f1Q07916 301 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fam89aQ14BJ1 175 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mars2Q499X9 586 aaKnown RBP9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pan2Q8BGF7 1200 aaKnown RBP9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zhx2Q8C0C0 836 aaKnown RBP9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zfp449Q8CB76 518 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm45261A0A1B0GSP6 197 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pdzd8B9EJ80 1147 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ddit3P35639 168 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tnni3kQ5GIG6 834 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Plcg2Q8CIH5 1265 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Smyd3Q9CWR2 428 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Bcl2l12Q9D3J3 255 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc70Q9D9B0 223 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tex21Q9R0U9 575 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Myo1cQ9WTI7 1063 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cdc42bpgQ80UW5 1551 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mapk6Q61532 720 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Usp44Q8C2S0 711 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PdgfdQ925I7 370 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Serpinb3bQ9D1Q5 387 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ggps1Q9WTN0 300 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gemin5Q8BX17 1502 aaKnown RBP9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Flt4P35917 1363 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lmnb2P21619 596 aaKnown RBP9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Thumpd3P97770 505 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Krt80Q0VBK2 452 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Smyd5Q3TYX3 416 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lamc2Q61092 1191 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Spata21Q8BHW6 681 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Clec4gQ8BNX1 294 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fra10ac1Q8BP78 315 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 MgarpQ8VI64 283 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cdk12Q14AX6 1484 aaKnown RBP9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ttc38A3KMP2 465 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Kcnk16G5E845 292 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cst8P32766 142 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm3414Q3TNU4 584 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ttc27Q8CD92 847 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ndst4Q9EQW8 872 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 YwhaeP62259 255 aaKnown RBP9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PoliQ6R3M4 717 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ppm1kQ8BXN7 372 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc159Q8C963 411 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Plch2A2AP18 1501 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tnip3A0A1D5RMN0 279 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dcdc2bF7BCK0 340 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 SpertQ32MG2 446 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 DpydQ8CHR6 1025 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tmem60Q8K174 133 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 GhdcQ99J23 532 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Abcg3Q99P81 650 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rtn3Q9ES97 964 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Eif2ak4Q9QZ05 1648 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ttc13A0A1L1SSC7 844 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Arhgap6O54834 987 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Sult1d1Q3UZZ6 295 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gngt2Q61017 69 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc50Q810U5 305 aaKnown RBP9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Snap47Q8R570 413 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cyp2c50Q91X77 490 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Spdl1Q923A2 608 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cd209bQ8CJ91 325 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ces1fQ91WU0 561 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 DSCC1Q14AI0 399 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zbtb8osQ505B7 168 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 VdrP48281 422 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cyp26b1Q811W2 512 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 CgasQ8C6L5 507 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Nrbf2Q8VCQ3 287 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Psmd2Q8VDM4 908 aa9.38□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms