RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Zfp626A0A0U1RQ84 676 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Nr2f2P43135 414 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Mcl1P97287 331 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gm3414Q3TNU4 584 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Fhod1Q6P9Q4 1197 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Vps37aQ8CHS8 397 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Q8VDP2 222 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cttnbp2nlQ99LJ0 638 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Kbtbd12Q9D618 625 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gbp4A4UUI3 631 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Krt40Q6IFX3 439 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tlr13Q6R5N8 991 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Fra10ac1Q8BP78 315 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Leng8Q8CBY3 785 aaKnown RBP11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cdk17Q8K0D0 523 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Krt34Q9D646 392 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Per2O54943 1257 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cdh15P33146 784 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 PtgdrP70263 357 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 GmipQ6PGG2 971 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Ppp1r12bQ8BG95 976 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tbc1d19Q8VDV7 526 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Pdia6Q922R8 440 aaKnown RBP11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Smarca1Q6PGB8 1046 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Pdik1lQ8QZR7 341 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 HibadhQ99L13 335 aaKnown RBP11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gins2Q9D600 185 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tex21Q9R0U9 575 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Akt3Q9WUA6 479 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tnni1Q9WUZ5 187 aa11.55□□□□□ -0.56
Ciita-201ENSMUST00000023147 Arhgef9Q3UTH8 516 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Flot2Q60634 428 aaKnown RBP11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Pole3Q9JKP7 145 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Zbtb7aO88939 569 aaKnown RBP11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Nr5a1P33242 462 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Pola2P33611 600 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Kcnk9Q3LS21 402 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Rsad1Q5SUV1 442 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Avpr1aQ62463 423 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Utp14bQ6EJB6 756 aaKnown RBP11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Rassf6Q80UQ2 353 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 NemfQ8CCP0 1064 aaKnown RBP11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Eps8l1Q8R5F8 716 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Creb3l3Q91XE9 479 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Wars2Q9CYK1 360 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Grtp1Q9D3N8 359 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tfap4Q9JIZ5 338 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cyth1Q9QX11 398 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Rnf4Q9QZS2 194 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Fut8Q9WTS2 575 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Slc12a7Q9WVL3 1083 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cacna2d1O08532 1103 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Brinp3Q499E0 766 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Otub1Q7TQI3 271 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Adprhl2Q8CG72 370 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Bud13Q8R149 637 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 ArpinQ9D0A3 226 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 ToporslQ9D2F8 683 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Ltb4r2Q9JJL9 360 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Mup5P11591 180 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 G3bp2P97379 482 aaKnown RBP11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Palb2Q3U0P1 1104 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Bbs9Q811G0 885 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gpt2Q8BGT5 522 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Osbpl6Q8BXR9 959 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 HmcesQ8R1M0 353 aaKnown RBP11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Serpinb3bQ9D1Q5 387 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Irx5Q9JKQ4 484 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 Stk25Q9Z2W1 426 aa11.54□□□□□ -0.56
Ciita-201ENSMUST00000023147 IghaA0A0A6YXW6 389 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Raph1F2Z3U3 1266 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Hnrnph1O35737 449 aaKnown RBP11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Hsdl2Q2TPA8 490 aaKnown RBP11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Itih1Q61702 907 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Naa35Q6PHQ8 725 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Prdm4Q80V63 803 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Drd5Q8BLD9 478 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Zcrb1Q9CZ96 217 aaKnown RBP11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Trim54Q9ERP3 366 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Caln1Q9JJG7 219 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gm28360A0A087WR25 190 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Mroh8E9PYI4 1049 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Krt1P04104 637 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 E2f8Q58FA4 860 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Rasa3Q60790 834 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Trim36Q80WG7 729 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Sgpp1Q9JI99 430 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 PigoQ9JJI6 1093 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 RaraP11416 462 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cep126Q0VBV7 1103 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tmem232Q5K6N0 675 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Ddx5Q61656 614 aaKnown RBP11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Impg2Q80XH2 1243 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Nol6Q8R5K4 1152 aaKnown RBP11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Rhobtb3Q9CTN4 611 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Snx5Q9D8U8 404 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gm9774A0A0A6YVU8 407 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Acnat1A2AKK5 416 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Nccrp1G3X9C2 266 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Rab3ipQ68EF0 428 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms