RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Slc14a1Q8VHL0 384 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Lztr1Q9CQ33 837 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Acsl3Q9CZW4 720 aaKnown RBP20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cfap57Q9D180 1249 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Edf1Q9JMG1 148 aaKnown RBP20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Adamtsl1Q8BLI0 1745 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 PtenO08586 403 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Idh1O88844 414 aaKnown RBP20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Serpina1aP07758 413 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Hoxa11P31311 313 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Serpina1cQ00896 412 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Serpina1dQ00897 413 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Znf583Q3V080 568 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Large2Q5XPT3 690 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 AarsQ8BGQ7 968 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Nemp2Q8CB65 421 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Acat1Q8QZT1 424 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Klhl36Q8R124 613 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Slc25a38Q91XD8 326 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Dph5Q9CWQ0 281 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Extl2Q9ES89 330 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Golgb1E9PVZ8 3238 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Myh11O08638 1972 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Osbpl7A2A716 963 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Gm2030D3Z7C4 212 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 GcP21614 476 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cd68P31996 326 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ephb4P54761 987 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Pkn1P70268 946 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 BC051142Q3V0M8 400 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Trim47Q8C0E3 641 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Btbd7Q8CFE5 1130 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 PhykplQ8R1K4 467 aa20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 SetQ9EQU5 289 aaKnown RBP20.31■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Rgl1Q60695 768 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 NrcamQ810U4 1256 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ythdf3Q8BYK6 585 aaKnown RBP20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cmtm5Q9D6G9 156 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Bcorl1A2AQH4 1781 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 R3hdm1E9Q9Q2 1135 aaKnown RBP20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Gimap9G3X987 291 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Gas7Q60780 421 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ppp1r1bQ60829 194 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 TbataQ7TSD4 393 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ints2Q80UK8 1198 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 StrcQ8VIM6 1809 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ly75Q60767 1723 aa20.3■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Stk10O55098 966 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Acot6Q32Q92 419 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ttyh3Q6P5F7 524 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Vgll2Q8BGW8 322 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Lmo3Q8BZL8 145 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Lrrc4cQ8C031 640 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Calhm4Q8CE93 315 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Fam20aQ8CID3 541 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Appl2Q8K3G9 662 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Trex1Q91XB0 314 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cabp5Q9JLK3 173 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Tnip1Q9WUU8 647 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ttc13A0A1L1SSC7 844 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Slc35g2D3YVE8 412 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Gm38392E9Q2A2 434 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Magea4F2Z493 315 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ndufaf2Q59J78 168 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Fbxw10Q5SUS0 1030 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Churc1Q6DG52 112 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ppp2r2aQ6P1F6 447 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Msl1Q6PDM1 616 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Fmnl3Q6ZPF4 1028 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Nucks1Q80XU3 234 aaKnown RBP20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Slc17a8Q8BFU8 601 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Fam187aQ9D3R5 417 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Actn2Q9JI91 894 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cntnap2Q9CPW0 1332 aa20.29■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Nova2D3YVV7 556 aaKnown RBP20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Tmod1P49813 359 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 MlxipQ2VPU4 917 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cyfip2Q5SQX6 1253 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 GmipQ6PGG2 971 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ece2Q80Z60 881 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Lrrc42Q8R2U7 421 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Reep2Q8VCD6 254 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Spdl1Q923A2 608 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Psma8Q9CWH6 250 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Scn3aA2ASI5 1947 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Fbf1A2A870 1173 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Gsg1l2M0QWL6 290 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Klc1O88447 541 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Got1P05201 413 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 CatspereP0DP43 985 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Epha3P29319 983 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 NppbP40753 121 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Fam107bQ3TGF2 131 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cracr2aQ3UP38 310 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Atp13a3Q5XF89 1219 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 ItgaeQ60677 1167 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Zbtb7bQ64321 544 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Vps37cQ8R105 352 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ttc5Q99LG4 440 aa20.28■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Trappc3O55013 180 aa20.27■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms