RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF120	YNL278W	YDR514C	Q04408	483 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	AIM33	Q04516	312 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	YMR310C	Q04867	317 aa	Predicted RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	CRD1	Q07560	283 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	YLL007C	Q07799	665 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	SDO1	Q07953	250 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	SVS1	Q12254	260 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	WTM1	Q12363	437 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	CAR1	P00812	333 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	MAS1	P10507	462 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	SLY1	P22213	666 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	NAR1	P23503	491 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	GDA1	P32621	518 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	CLG1	P35190	452 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	YBR139W	P38109	508 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	SEN34	P39707	275 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	RPN3	P40016	523 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	SER3	P40054	469 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	RFC4	P40339	323 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	HPM1	P40481	377 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	COG1	P53079	417 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	PNC1	P53184	216 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	GET1	P53192	235 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	DRN1	P53255	507 aa	Known RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	NOP19	P53317	196 aa	Predicted RBP	2.6	□□□□□ -1.99
CAF120	YNL278W	COS6	P53344	381 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	AQR1	P53943	586 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	ACS1	Q01574	713 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	REC102	Q02721	264 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	MSC2	Q03455	724 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	YDR248C	Q03786	193 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	CTS2	Q06350	511 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	CDD1	Q06549	142 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	NSE1	Q07913	336 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	UBX3	Q12229	455 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	TAO3	P40468	2376 aa		2.6	□□□□□ -1.99
CAF120	YNL278W	SCEI	P03882	235 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	TUB1	P09733	447 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	POL30	P15873	258 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	CDC23	P16522	626 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SNF6	P18888	332 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SCL1	P21243	252 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	BEM1	P29366	551 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SPS18	P32572	300 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	CYM1	P32898	989 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SRP102	P36057	244 aa	Predicted RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	YKL070W	P36087	169 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	POP8	P38208	133 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	IML3	P38265	245 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	OPT1	P40897	799 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	ERG10	P41338	398 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	ECM27	P47144	725 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	NSA1	P53136	463 aa	Predicted RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	ZRG17	P53735	605 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	EFM6	P53970	246 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	RHO3	Q00245	231 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	GCN5	Q03330	439 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	YMD8	Q03697	442 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SWT1	Q12104	458 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	VAM3	Q12241	283 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SFM1	Q12314	213 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SUL2	Q12325	893 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	ZRT2	Q12436	422 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	VPS63	O13549	108 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	RPP2A	P05319	106 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	NHP6B	P11633	99 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	CAM1	P29547	415 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	TCA17	P32613	152 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	YOX1	P34161	385 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SOL2	P37262	315 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SDH8	P38345	138 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	URA8	P38627	578 aa	Predicted RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	GIC1	P38785	314 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	ERV46	P39727	415 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	PZF1	P39933	429 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	DLD3	P39976	496 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	RGI2	P40188	164 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	FMC1	P40491	155 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	YIL054W	P40524	105 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	STB1	P42845	420 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	IMD4	P50094	524 aa	Known RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	CUS2	P53830	285 aa	Predicted RBP	2.59	□□□□□ -1.99
CAF120	YNL278W	TRM82	Q03774	444 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	RKM2	Q03942	479 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	ROY1	Q04847	553 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SPO77	Q06134	477 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	YPR196W	Q06595	470 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	GSH2	Q08220	491 aa		2.59	□□□□□ -1.99
CAF120	YNL278W	SEC53	P07283	254 aa	Known RBP	2.59	□□□□□ -2
CAF120	YNL278W	ARG1	P22768	420 aa		2.59	□□□□□ -2
CAF120	YNL278W	CPR2	P23285	205 aa		2.59	□□□□□ -2
CAF120	YNL278W	PRE7	P23724	241 aa	Known RBP	2.59	□□□□□ -2
CAF120	YNL278W	PUP3	P25451	205 aa	Known RBP	2.59	□□□□□ -2
CAF120	YNL278W	YCR061W	P25639	631 aa		2.59	□□□□□ -2
CAF120	YNL278W	TOD6	P34219	525 aa		2.59	□□□□□ -2
CAF120	YNL278W	YKL071W	P36086	256 aa		2.59	□□□□□ -2
CAF120	YNL278W	ALY1	P36117	915 aa		2.59	□□□□□ -2
CAF120	YNL278W	LDB7	P38210	180 aa		2.59	□□□□□ -2
CAF120	YNL278W	REG2	P38232	338 aa		2.59	□□□□□ -2
CAF120	YNL278W	IPT1	P38954	527 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms