RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YPR202WQ08993 238 aa1.86□□□□□ -2.11
PRE4YFR050C MDM35O60200 86 aa1.85□□□□□ -2.11
PRE4YFR050C SEC53P07283 254 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C RPL19AP0CX82 189 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C RPL19BP0CX83 189 aaPredicted RBP1.85□□□□□ -2.11
PRE4YFR050C NAM2P11325 894 aa1.85□□□□□ -2.11
PRE4YFR050C ART10P18634 518 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C CDC42P19073 191 aa1.85□□□□□ -2.11
PRE4YFR050C EXO70P19658 623 aa1.85□□□□□ -2.11
PRE4YFR050C CRM1P30822 1084 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C AGA1P32323 725 aa1.85□□□□□ -2.11
PRE4YFR050C NOP4P37838 685 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C YBR062CP38239 180 aa1.85□□□□□ -2.11
PRE4YFR050C MSR1P38714 643 aa1.85□□□□□ -2.11
PRE4YFR050C GRE3P38715 327 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
PRE4YFR050C ALG5P40350 334 aa1.85□□□□□ -2.11
PRE4YFR050C AVT7P40501 490 aa1.85□□□□□ -2.11
PRE4YFR050C RPR2P40571 144 aa1.85□□□□□ -2.11
PRE4YFR050C MNN5P46982 586 aa1.85□□□□□ -2.11
PRE4YFR050C YJR154WP47181 346 aa1.85□□□□□ -2.11
PRE4YFR050C APT1P49435 187 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C PDR16P53860 351 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C KTR6P54070 446 aa1.85□□□□□ -2.11
PRE4YFR050C RPM2Q02773 1202 aa1.85□□□□□ -2.11
PRE4YFR050C SKI8Q02793 397 aaPredicted RBP1.85□□□□□ -2.11
PRE4YFR050C RLI1Q03195 608 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C ERP1Q05359 219 aaKnown RBP1.85□□□□□ -2.11
PRE4YFR050C YDL144CQ07589 356 aa1.85□□□□□ -2.11
PRE4YFR050C YDL009CQ12210 107 aa1.85□□□□□ -2.11
PRE4YFR050C HSH49Q99181 213 aaPredicted RBP1.85□□□□□ -2.11
PRE4YFR050C HEM4P06174 275 aa1.84□□□□□ -2.11
PRE4YFR050C MET2P08465 486 aa1.84□□□□□ -2.11
PRE4YFR050C SCH9P11792 824 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C CBS2P14905 389 aa1.84□□□□□ -2.11
PRE4YFR050C KAR3P17119 729 aa1.84□□□□□ -2.11
PRE4YFR050C MET16P18408 261 aaPredicted RBP1.84□□□□□ -2.11
PRE4YFR050C MCK1P21965 375 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C PEP3P27801 918 aa1.84□□□□□ -2.11
PRE4YFR050C PAP1P29468 568 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C SPC110P32380 944 aa1.84□□□□□ -2.11
PRE4YFR050C SWI3P32591 825 aa1.84□□□□□ -2.11
PRE4YFR050C SAC6P32599 642 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C VMA11P32842 164 aa1.84□□□□□ -2.11
PRE4YFR050C KAP104P38217 918 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C SHO1P40073 367 aa1.84□□□□□ -2.11
PRE4YFR050C ABM1P47146 123 aa1.84□□□□□ -2.11
PRE4YFR050C IRC15Q02733 499 aa1.84□□□□□ -2.11
PRE4YFR050C MSC1Q03104 513 aa1.84□□□□□ -2.11
PRE4YFR050C NGL3Q03210 505 aa1.84□□□□□ -2.11
PRE4YFR050C FMN1Q03778 218 aa1.84□□□□□ -2.11
PRE4YFR050C MRPL51Q06090 140 aaPredicted RBP1.84□□□□□ -2.11
PRE4YFR050C KAP95Q06142 861 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C VPS74Q06385 345 aa1.84□□□□□ -2.11
PRE4YFR050C SYO1Q07395 620 aa1.84□□□□□ -2.11
PRE4YFR050C THP1Q08231 455 aa1.84□□□□□ -2.11
PRE4YFR050C AYT1Q12226 474 aa1.84□□□□□ -2.11
PRE4YFR050C LSP1Q12230 341 aaKnown RBP1.84□□□□□ -2.11
PRE4YFR050C SPE4Q12455 300 aa1.84□□□□□ -2.11
PRE4YFR050C ARG4P04076 463 aaPredicted RBP1.83□□□□□ -2.12
PRE4YFR050C RAD52P06778 471 aaKnown RBP1.83□□□□□ -2.12
PRE4YFR050C MRP13P12686 339 aa1.83□□□□□ -2.12
PRE4YFR050C PUT4P15380 627 aa1.83□□□□□ -2.12
PRE4YFR050C SAN1P22470 610 aa1.83□□□□□ -2.12
PRE4YFR050C ROX1P25042 368 aa1.83□□□□□ -2.12
PRE4YFR050C ECM25P32525 599 aa1.83□□□□□ -2.12
PRE4YFR050C SPS19P32573 292 aaKnown RBP1.83□□□□□ -2.12
PRE4YFR050C PMU1P36069 295 aa1.83□□□□□ -2.12
PRE4YFR050C BNA4P38169 460 aa1.83□□□□□ -2.12
PRE4YFR050C SDS24P38314 527 aa1.83□□□□□ -2.12
PRE4YFR050C ALG8P40351 577 aa1.83□□□□□ -2.12
PRE4YFR050C IMD4P50094 524 aaKnown RBP1.83□□□□□ -2.12
PRE4YFR050C SBH2P52871 88 aa1.83□□□□□ -2.12
PRE4YFR050C MND1P53102 219 aa1.83□□□□□ -2.12
PRE4YFR050C GPI1P53306 609 aa1.83□□□□□ -2.12
PRE4YFR050C YEH1Q07804 573 aa1.83□□□□□ -2.12
PRE4YFR050C FCY22Q12119 530 aa1.83□□□□□ -2.12
PRE4YFR050C YLL056CQ12177 298 aa1.83□□□□□ -2.12
PRE4YFR050C PSY3Q12318 242 aa1.83□□□□□ -2.12
PRE4YFR050C WTM1Q12363 437 aaKnown RBP1.83□□□□□ -2.12
PRE4YFR050C RAX2Q12465 1220 aa1.83□□□□□ -2.12
PRE4YFR050C YPT6Q99260 215 aa1.83□□□□□ -2.12
PRE4YFR050C ATR1P13090 542 aa1.82□□□□□ -2.12
PRE4YFR050C VPS1P21576 704 aaKnown RBP1.82□□□□□ -2.12
PRE4YFR050C RBK1P25332 333 aa1.82□□□□□ -2.12
PRE4YFR050C YCR007CP25354 239 aa1.82□□□□□ -2.12
PRE4YFR050C STP22P25604 385 aa1.82□□□□□ -2.12
PRE4YFR050C ITR2P30606 609 aa1.82□□□□□ -2.12
PRE4YFR050C LOS1P33418 1100 aaPredicted RBP1.82□□□□□ -2.12
PRE4YFR050C YOX1P34161 385 aa1.82□□□□□ -2.12
PRE4YFR050C TIF3P34167 436 aaKnown RBP1.82□□□□□ -2.12
PRE4YFR050C AVT5P38176 459 aa1.82□□□□□ -2.12
PRE4YFR050C FLC2P39719 783 aa1.82□□□□□ -2.12
PRE4YFR050C TMA108P40462 946 aa1.82□□□□□ -2.12
PRE4YFR050C CAK1P43568 368 aaPredicted RBP1.82□□□□□ -2.12
PRE4YFR050C RPE1P46969 238 aa1.82□□□□□ -2.12
PRE4YFR050C COS10P52924 374 aa1.82□□□□□ -2.12
PRE4YFR050C WSC2P53832 503 aa1.82□□□□□ -2.12
PRE4YFR050C CGI121Q03705 181 aaKnown RBP1.82□□□□□ -2.12
PRE4YFR050C PHO92Q06390 306 aa1.82□□□□□ -2.12
PRE4YFR050C CMS1Q07897 291 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 183.7 ms